ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103642232	uncharacterized LOC103642232
zma-r.6	103642232	uncharacterized LOC103642232
zma-u.5	100281146	endo-1,4-beta-glucanase
zma-u.5	100274698	uncharacterized LOC100274698
zma-u.5	100285405	endo-1,4-beta-glucanase Cel1
sbi-r.1	8155674	endoglucanase 12
sbi-r.1	8085976	endoglucanase 10
sbi-r.1	8060203	endoglucanase 12
osa-u.5	4332724	endoglucanase 9-like
osa-u.5	4336284	endoglucanase 12-like
osa-u.5	4334029	endoglucanase 10-like
tae-r.2	123189651	endoglucanase 12
tae-r.2	123097583	endoglucanase 9
tae-r.2	123092246	endoglucanase 9
hvu-r.1	123448739	endoglucanase 9-like
hvu-r.1	123447698	endoglucanase 10
hvu-r.1	123427123	endoglucanase 12
bdi-r.1	100834535	endoglucanase 9
bdi-r.1	100846262	endoglucanase 12
bdi-r.1	100842910	endoglucanase 10
ath-u.5	GH9A3	glycosyl hydrolase 9A3
ath-u.5	GH9A1	glycosyl hydrolase 9A1
ath-u.5	KOR2	Six-hairpin glycosidases superfamily protein
gma-u.5	CEL12	endo-1,4-beta-glucancase
gma-u.5	100807040	endoglucanase 12
gma-u.5	100793289	endoglucanase 25
sly-u.5	101244370	endoglucanase 25-like
sly-u.5	Cel3	endo-1,4-beta-glucanase
sly-u.5	101254155	endoglucanase 12
bra-r.6	103848388	endoglucanase 25
bra-r.6	103852247	endoglucanase 7
vvi-u.5	109123547	endoglucanase 25
vvi-u.5	100257176	endoglucanase 12
ppo-u.5	7491486	endoglucanase 25
ppo-u.5	7474386	endoglucanase 12
mtr-u.5	11427002	endoglucanase 12
mtr-u.5	11412111	endoglucanase 25
ghi-r.1	107914187	endoglucanase 25
ghi-r.1	107939379	endoglucanase 25-like
bna-r.1	106442921	endoglucanase 7
bna-r.1	106348937	endoglucanase 21
bna-r.1	111213397	endoglucanase 25
sot-r.1	102596032	endoglucanase 25-like
sot-r.1	102598742	endoglucanase 12
sot-r.1	102580651	endoglucanase 25-like
cit-r.1	102625495	endoglucanase 12
cit-r.1	102627125	endoglucanase 25
nta-r.1	107824972	endoglucanase 12-like
nta-r.1	107811383	endoglucanase 25
nta-r.1	107807901	endoglucanase 25

Top 50 coexpressed genes to 103642232 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103642232 (zma-u.5 coexpression data)

CoexMap"103642232"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00500 [list] [network] Starch and sucrose metabolism (180 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(898 genes)

IEA

GO CC

GO MF

GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds

(428 genes)

IEA

Protein

NP_001288466.1 [sequence] [blastp]

Subcellular
localization
wolf

pero 3, nucl 2, cyto 2, cyto_nucl 2

(predict for NP_001288466.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001288466.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103642232	zma-r.6 for 103642232	zma-u.5 for 100281146	zma-u.5 for 100274698	zma-u.5 for 100285405	sbi-r.1 for 8155674	sbi-r.1 for 8085976	sbi-r.1 for 8060203	osa-u.5 for 4332724	osa-u.5 for 4336284	osa-u.5 for 4334029	tae-r.2 for 123189651	tae-r.2 for 123097583	tae-r.2 for 123092246	hvu-r.1 for 123448739	hvu-r.1 for 123447698	hvu-r.1 for 123427123	bdi-r.1 for 100834535	bdi-r.1 for 100846262	bdi-r.1 for 100842910	ath-u.5 for GH9A3	ath-u.5 for GH9A1	ath-u.5 for KOR2	gma-u.5 for CEL12	gma-u.5 for 100807040	gma-u.5 for 100793289	sly-u.5 for 101244370	sly-u.5 for Cel3	sly-u.5 for 101254155	bra-r.6 for 103848388	bra-r.6 for 103852247	vvi-u.5 for 109123547	vvi-u.5 for 100257176	ppo-u.5 for 7491486	ppo-u.5 for 7474386	mtr-u.5 for 11427002	mtr-u.5 for 11412111	ghi-r.1 for 107914187	ghi-r.1 for 107939379	bna-r.1 for 106442921	bna-r.1 for 106348937	bna-r.1 for 111213397	sot-r.1 for 102596032	sot-r.1 for 102598742	sot-r.1 for 102580651	cit-r.1 for 102625495	cit-r.1 for 102627125	nta-r.1 for 107824972	nta-r.1 for 107811383	nta-r.1 for 107807901

Ortholog

Ortholog ID: 1182

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

GH9A3

GH9A1

KOR2

CEL12

Cel3

Function^*

uncharacterized LOC103642232

endo-1,4-beta-glucanase

uncharacterized LOC100274698

endoglucanase 12

endoglucanase 9

endoglucanase 9-like

endoglucanase 12-like

endoglucanase 10-like

endoglucanase 9

endoglucanase 10

endoglucanase 12

endoglucanase 9-like

endoglucanase 10

endoglucanase 12

endoglucanase 9

endoglucanase 12

endoglucanase 10

glycosyl hydrolase 9A3

glycosyl hydrolase 9A1

Six-hairpin glycosidases superfamily protein

endo-1,4-beta-glucancase

endoglucanase 12

endoglucanase 25

endoglucanase 25-like

endo-1,4-beta-glucanase

endoglucanase 12

endoglucanase 25

endoglucanase 7

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 25-like

endoglucanase 25

endoglucanase 21

endoglucanase 25-like

endoglucanase 12

endoglucanase 25-like

endoglucanase 12

endoglucanase 25

endoglucanase 25-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	3
osa00053	Ascorbate and aldarate metabolism	3
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00541	Biosynthesis of various nucleotide sugars	3
osa01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4
tae04145	Phagosome	3
tae04517	IgSF CAM signaling	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	5
bdi01250	Biosynthesis of nucleotide sugars	5
bdi01240	Biosynthesis of cofactors	4
bdi00040	Pentose and glucuronate interconversions	3
bdi00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	4
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma01240	Biosynthesis of cofactors	3
gma00053	Ascorbate and aldarate metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00730	Thiamine metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	6
bra00630	Glyoxylate and dicarboxylate metabolism	5
bra00380	Tryptophan metabolism	3
bra04016	MAPK signaling pathway - plant	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
sot00360	Phenylalanine metabolism	3
sot00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

103642232

100281146

100274698

8155674

8060203

8084557

4332724

4336284

4334029

123092246

123091027

123045894

123448739

123447698

123427123

100834535

100846262

100842910

828527

835035

842872

100037483

100807040

100805472

101244370

544032

101254155

103848388

103852247

109123547

100257176

7491486

7460657

11427002

11412111

107939379

111213397

106388500

106444607

102596032

102598742

102580651

102625495

102627125

107811383

107792901

107820555

The preparation time of this page was 1.3 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	3	3	3	3	3	3	3	2	2	2	2	2	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103642232 (zma-u.5 coexpression data)

Top 50 enrichment test to 103642232 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**