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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103643842   uncharacterized LOC103643842 
 zma-r.6   103643842   uncharacterized LOC103643842 
 zma-m.5   103643842   uncharacterized LOC103643842 
 zma-u.5   100274109   uncharacterized LOC100274109 
 sbi-r.1   8054130   uncharacterized LOC8054130 
 osa-u.5   4333802   FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic 
 tae-r.2   123087190   uncharacterized LOC123087190 
 tae-r.2   123090764   uncharacterized LOC123090764 
 tae-r.2   123095778   uncharacterized LOC123095778 
 hvu-r.1   123447265   uncharacterized LOC123447265 
 bdi-r.1   100843817   uncharacterized LOC100843817 
 ath-u.5   AT1G54520   myelin-associated oligodendrocyte basic protein 
 gma-u.5   100800250   uncharacterized LOC100800250 
 sly-u.5   101244036   FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic 
 bra-r.6   103867451   uncharacterized LOC103867451 
 vvi-u.5   100854337   uncharacterized LOC100854337 
 ppo-u.5   18098934   uncharacterized LOC18098934 
 mtr-u.5   25502583   uncharacterized LOC25502583 
 mtr-u.5   11431324   uncharacterized LOC11431324 
 ghi-r.1   107963013   uncharacterized LOC107963013 
 ghi-r.1   107945970   uncharacterized LOC107945970 
 ghi-r.1   107937890   uncharacterized LOC107937890 
 bna-r.1   111212738   uncharacterized LOC111212738 
 bna-r.1   125579175   uncharacterized LOC125579175 
 sot-r.1   102599811   uncharacterized LOC102599811 
 cit-r.1   102608290   uncharacterized LOC102608290 
 nta-r.1   107792708   FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic 
 nta-r.1   107768484   FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic 
 nta-r.1   107828193   FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic-like 
 cre-r.1   CHLRE_01g004450v5   uncharacterized protein 

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Top 50 coexpressed genes to 103643842 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103643842 (zma-u.5 coexpression data)

CoexMap"103643842"


zmaLOC103643842 | Entrez gene ID : 103643842      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 1 1 1 1 1 1 2 3 2 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (803 genes)  IEA  
GO MF
Protein XP_008665229.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  plas 1,  pero 1,  cyto_mito 1  (predict for XP_008665229.1)
Subcellular
localization
TargetP
mito 7,  chlo 4  (predict for XP_008665229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103643842
zma-r.6
for
103643842
zma-m.5
for
103643842
zma-u.5
for
100274109
sbi-r.1
for
8054130
osa-u.5
for
4333802
tae-r.2
for
123087190
tae-r.2
for
123090764
tae-r.2
for
123095778
hvu-r.1
for
123447265
bdi-r.1
for
100843817
ath-u.5
for
AT1G54520
gma-u.5
for
100800250
sly-u.5
for
101244036
bra-r.6
for
103867451
vvi-u.5
for
100854337
ppo-u.5
for
18098934
mtr-u.5
for
25502583
mtr-u.5
for
11431324
ghi-r.1
for
107963013
ghi-r.1
for
107945970
ghi-r.1
for
107937890
bna-r.1
for
111212738
bna-r.1
for
125579175
sot-r.1
for
102599811
cit-r.1
for
102608290
nta-r.1
for
107792708
nta-r.1
for
107768484
nta-r.1
for
107828193
cre-r.1
for
CHLRE_01g004450v5


Ortholog ID: 8284
Species zma zma sbi osa tae tae tae hvu bdi ath gma sly bra vvi ppo mtr mtr ghi ghi ghi bna bna sot cit nta nta nta cre
Symbol LOC103643842 LOC100274109 LOC8054130 LOC4333802 LOC123087190 LOC123090764 LOC123095778 LOC123447265 LOC100843817 AT1G54520 LOC100800250 LOC101244036 LOC103867451 LOC100854337 LOC18098934 LOC25502583 LOC11431324 LOC107963013 LOC107937890 LOC107888772 LOC111212738 LOC125579175 LOC102599811 LOC102608290 LOC107792708 LOC107768484 LOC107828193 CHLRE_01g004450v5
Function* uncharacterized LOC103643842 uncharacterized LOC100274109 uncharacterized LOC8054130 FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic uncharacterized LOC123087190 uncharacterized LOC123090764 uncharacterized LOC123095778 uncharacterized LOC123447265 uncharacterized LOC100843817 myelin-associated oligodendrocyte basic protein uncharacterized LOC100800250 FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic uncharacterized LOC103867451 uncharacterized LOC100854337 uncharacterized LOC18098934 uncharacterized LOC25502583 uncharacterized LOC11431324 uncharacterized LOC107963013 uncharacterized LOC107937890 uncharacterized LOC107888772 uncharacterized LOC111212738 uncharacterized LOC125579175 uncharacterized LOC102599811 uncharacterized LOC102608290 FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00710 Carbon fixation by Calvin cycle 4
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly01230 Biosynthesis of amino acids 3
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit04016 MAPK signaling pathway - plant 2
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta03015 mRNA surveillance pathway 2
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103643842 100274109 8054130 4333802 123087190 123090764 123095778 123447265 100843817 841894 100800250 101244036 103867451 100854337 18098934 25502583 11431324 107963013 107937890 107888772 111212738 125579175 102599811 102608290 107792708 107768484 107828193 5727676
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