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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103645654   KH domain-containing protein At4g18375-like 
 zma-r.6   103645654   KH domain-containing protein At4g18375-like 
 zma-u.5   109946006   KH domain-containing protein At4g18375 
 zma-u.5   100384498   RNA-binding KH domain-containing protein 
 sbi-r.1   8085026   KH domain-containing protein At4g18375 
 osa-u.5   4344900   KH domain-containing protein At4g18375 
 tae-r.2   123087608   KH domain-containing protein At4g18375 
 tae-r.2   123080896   KH domain-containing protein At4g18375 
 tae-r.2   123072718   KH domain-containing protein At4g18375 
 hvu-r.1   123395111   KH domain-containing protein At4g18375-like 
 hvu-r.1   123445624   KH domain-containing protein At4g18375-like 
 bdi-r.1   100827182   KH domain-containing protein At4g18375 
 ath-u.5   AT4G18375   RNA-binding KH domain-containing protein 
 ath-u.5   AT5G46190   RNA-binding KH domain-containing protein 
 gma-u.5   100801062   KH domain-containing protein At4g18375 
 sly-u.5   101248503   KH domain-containing protein At4g18375 
 bra-r.6   103827748   KH domain-containing protein At4g18375 
 bra-r.6   103856291   KH domain-containing protein At4g18375 
 vvi-u.5   100261680   KH domain-containing protein At4g18375 
 ppo-u.5   7495314   KH domain-containing protein At4g18375 
 ppo-u.5   7490830   KH domain-containing protein At4g18375 
 mtr-u.5   120577447   KH domain-containing protein At4g18375 
 mtr-u.5   11439323   KH domain-containing protein At4g18375 
 ghi-r.1   107889039   KH domain-containing protein At4g18375 
 ghi-r.1   107891745   KH domain-containing protein At4g18375 
 bna-r.1   106357469   KH domain-containing protein At4g18375-like 
 bna-r.1   106375672   KH domain-containing protein At4g18375 
 bna-r.1   106401685   KH domain-containing protein At4g18375 
 sot-r.1   102583330   KH domain-containing protein At4g18375 
 cit-r.1   102616634   KH domain-containing protein At4g18375 
 nta-r.1   107814867   KH domain-containing protein At4g18375 
 nta-r.1   107819928   KH domain-containing protein At4g18375 

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Top 50 coexpressed genes to 103645654 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103645654 (zma-u.5 coexpression data)

CoexMap"103645654"


zmaLOC103645654 | Entrez gene ID : 103645654    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 2 1 2 1 1 2 1 2 2 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein XP_020399982.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 1,  chlo 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_020399982.1)
Subcellular
localization
TargetP
other 8  (predict for XP_020399982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103645654
zma-r.6
for
103645654
zma-u.5
for
109946006
zma-u.5
for
100384498
sbi-r.1
for
8085026
osa-u.5
for
4344900
tae-r.2
for
123087608
tae-r.2
for
123080896
tae-r.2
for
123072718
hvu-r.1
for
123395111
hvu-r.1
for
123445624
bdi-r.1
for
100827182
ath-u.5
for
AT4G18375
ath-u.5
for
AT5G46190
gma-u.5
for
100801062
sly-u.5
for
101248503
bra-r.6
for
103827748
bra-r.6
for
103856291
vvi-u.5
for
100261680
ppo-u.5
for
7495314
ppo-u.5
for
7490830
mtr-u.5
for
120577447
mtr-u.5
for
11439323
ghi-r.1
for
107889039
ghi-r.1
for
107891745
bna-r.1
for
106357469
bna-r.1
for
106375672
bna-r.1
for
106401685
sot-r.1
for
102583330
cit-r.1
for
102616634
nta-r.1
for
107814867
nta-r.1
for
107819928


Ortholog ID: 6040
Species zma zma zma sbi osa tae tae tae hvu hvu bdi ath ath gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC103645654 LOC109946006 LOC100384498 LOC8085026 LOC4344900 LOC123063579 LOC123114325 LOC123123811 LOC123395111 LOC123445624 LOC100827182 AT4G18375 AT5G46190 LOC100801062 LOC101248503 LOC103827748 LOC103856291 LOC100261680 LOC7495314 LOC7490830 LOC120577447 LOC11439323 LOC107889039 LOC107891745 LOC106357469 LOC106401685 LOC106436856 LOC102583330 LOC102616634 LOC107814867 LOC107819928
Function* KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 6
bna00513 Various types of N-glycan biosynthesis 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 3
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03015 mRNA surveillance pathway 3
cit03250 Viral life cycle - HIV-1 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103645654 109946006 100384498 8085026 4344900 123063579 123114325 123123811 123395111 123445624 100827182 827566 834661 100801062 101248503 103827748 103856291 100261680 7495314 7490830 120577447 11439323 107889039 107891745 106357469 106401685 106436856 102583330 102616634 107814867 107819928
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