ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	103649787	uncharacterized LOC103649787
zma-r.6	103649787	uncharacterized LOC103649787
zma-u.5	118476916	nuclear pore complex protein NUP43
zma-u.5	103636987	uncharacterized LOC103636987
osa-u.5	4345122	nuclear pore complex protein NUP43
ath-u.5	AT4G30840	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100778776	nuclear pore complex protein NUP43
gma-u.5	100795073	nuclear pore complex protein NUP43
sly-u.5	101252300	nuclear pore complex protein NUP43
vvi-u.5	100251872	nuclear pore complex protein NUP43
ppo-u.5	112327891	nuclear pore complex protein NUP43
mtr-u.5	11440795	nuclear pore complex protein NUP43

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_008673721.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 3, E.R._vacu 2, nucl 1, mito 1, extr 1

(predict for XP_008673721.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_008673721.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103649787	zma-r.6 for 103649787	zma-u.5 for 118476916	zma-u.5 for 103636987	osa-u.5 for 4345122	ath-u.5 for AT4G30840	gma-u.5 for 100778776	gma-u.5 for 100795073	sly-u.5 for 101252300	vvi-u.5 for 100251872	ppo-u.5 for 112327891	mtr-u.5 for 11440795

Ortholog ID: 8566

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

nuclear pore complex protein NUP43

uncharacterized LOC103636987

nuclear pore complex protein NUP43

Transducin/WD40 repeat-like superfamily protein

nuclear pore complex protein NUP43

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03083	Polycomb repressive complex	2
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	3
ath03410	Base excision repair	3
ath03010	Ribosome	2
ath03008	Ribosome biogenesis in eukaryotes	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma00190	Oxidative phosphorylation	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03010	Ribosome	3
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	3
mtr00260	Glycine, serine and threonine metabolism	2
mtr00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03013	Nucleocytoplasmic transport	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03082	ATP-dependent chromatin remodeling	2
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00100	Steroid biosynthesis	2
cit00010	Glycolysis / Gluconeogenesis	2
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta03010	Ribosome	4
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta03008	Ribosome biogenesis in eukaryotes	4
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	4

Expression

Expression pattern

Entrez Gene ID^*

118476916

103636987

8073287

4345122

123187103

123104935

123444467

100834630

829208

100778776

100795073

101252300

103862009

100251872

112327891

11440795

107907458

107958677

106352929

106410549

102598589

102623054

107792823

107793361

5727473

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103649787 (zma-u.5 coexpression data)

Top 50 enrichment test to 103649787 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103649787 (zma-u.5 coexpression data)

Top 50 enrichment test to 103649787 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**