ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106352929	nuclear pore complex protein NUP43
bna-r.1	106410549	nuclear pore complex protein NUP43
bra-r.6	103862009	nuclear pore complex protein NUP43
ath-u.5	AT4G30840	Transducin/WD40 repeat-like superfamily protein
ghi-r.1	107907458	nuclear pore complex protein NUP43
ghi-r.1	107958677	nuclear pore complex protein NUP43
cit-r.1	102623054	nuclear pore complex protein NUP43
gma-u.5	100778776	nuclear pore complex protein NUP43
gma-u.5	100795073	nuclear pore complex protein NUP43
vvi-u.5	100251872	nuclear pore complex protein NUP43
ppo-u.5	112327891	nuclear pore complex protein NUP43
mtr-u.5	11440795	nuclear pore complex protein NUP43
sly-u.5	101252300	nuclear pore complex protein NUP43
sot-r.1	102598589	nuclear pore complex protein NUP43
nta-r.1	107793361	nuclear pore complex protein NUP43
nta-r.1	107792823	nuclear pore complex protein NUP43
osa-u.5	4345122	nuclear pore complex protein NUP43
zma-u.5	118476916	nuclear pore complex protein NUP43
zma-u.5	103649787	uncharacterized LOC103649787
zma-u.5	103636987	uncharacterized LOC103636987
tae-r.2	123104935	nuclear pore complex protein NUP43
tae-r.2	123179990	nuclear pore complex protein NUP43
tae-r.2	123187103	nuclear pore complex protein NUP43
hvu-r.1	123444467	nuclear pore complex protein NUP43
sbi-r.1	8073287	nuclear pore complex protein NUP43
bdi-r.1	100834630	nuclear pore complex protein NUP43
cre-r.1	CHLRE_02g090600v5	uncharacterized protein

Annotation

functional annotation

KEGG

bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)

GO BP

GO CC

GO:0031080 [list] [network] nuclear pore outer ring

(21 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(12789 genes)

IEA

Protein

XP_013648038.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 4, mito 1

(predict for XP_013648038.1)

Subcellular
localization
TargetP

other 6

(predict for XP_013648038.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106352929	bna-r.1 for 106410549	bra-r.6 for 103862009	ath-u.5 for AT4G30840	ghi-r.1 for 107907458	ghi-r.1 for 107958677	cit-r.1 for 102623054	gma-u.5 for 100778776	gma-u.5 for 100795073	vvi-u.5 for 100251872	ppo-u.5 for 112327891	mtr-u.5 for 11440795	sly-u.5 for 101252300	sot-r.1 for 102598589	nta-r.1 for 107793361	nta-r.1 for 107792823	osa-u.5 for 4345122	zma-u.5 for 118476916	zma-u.5 for 103649787	zma-u.5 for 103636987	tae-r.2 for 123104935	tae-r.2 for 123179990	tae-r.2 for 123187103	hvu-r.1 for 123444467	sbi-r.1 for 8073287	bdi-r.1 for 100834630	cre-r.1 for CHLRE_02g090600v5

Ortholog

Ortholog ID: 8566

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

nuclear pore complex protein NUP43

Transducin/WD40 repeat-like superfamily protein

nuclear pore complex protein NUP43

uncharacterized LOC103649787

uncharacterized LOC103636987

nuclear pore complex protein NUP43

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03082	ATP-dependent chromatin remodeling	2
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	3
ath03410	Base excision repair	3
ath03010	Ribosome	2
ath03008	Ribosome biogenesis in eukaryotes	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	3
ghi03013	Nucleocytoplasmic transport	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00100	Steroid biosynthesis	2
cit00010	Glycolysis / Gluconeogenesis	2
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma00190	Oxidative phosphorylation	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03010	Ribosome	3
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	3
mtr00260	Glycine, serine and threonine metabolism	2
mtr00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta03008	Ribosome biogenesis in eukaryotes	4
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta03010	Ribosome	4
nta03082	ATP-dependent chromatin remodeling	2
nta03040	Spliceosome	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03083	Polycomb repressive complex	2
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	4

Expression

Expression pattern

Entrez Gene ID^*

106352929

106410549

103862009

829208

107907458

107958677

102623054

100778776

100795073

100251872

112327891

11440795

101252300

102598589

107793361

107792823

4345122

118476916

103649787

103636987

123104935

123179990

123187103

123444467

8073287

100834630

5727473

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106352929 (bna-r.1 coexpression data)

Top 50 enrichment test to 106352929 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	2	1	1	1	1	1	2	1	3	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106352929 (bna-r.1 coexpression data)

Top 50 enrichment test to 106352929 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**