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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103651348   glutamate synthase 1 [NADH], chloroplastic 
 zma-r.6   103651348   glutamate synthase 1 [NADH], chloroplastic 
 zma-m.5   103651348   glutamate synthase 1 [NADH], chloroplastic 
 zma-u.5   103636185   glutamate synthase 1 [NADH], chloroplastic 
 sbi-r.1   8068026   glutamate synthase 1 [NADH], chloroplastic 
 sbi-r.1   8074568   glutamate synthase 2 [NADH], chloroplastic 
 osa-u.5   4324398   glutamate synthase 1 [NADH], chloroplastic-like 
 osa-u.5   4339561   glutamate synthase 2 [NADH], chloroplastic-like 
 tae-r.2   123061864   glutamate synthase 1 [NADH], chloroplastic 
 tae-r.2   123070558   glutamate synthase 1 [NADH], chloroplastic 
 tae-r.2   123078967   glutamate synthase 1 [NADH], chloroplastic 
 hvu-r.1   123444122   glutamate synthase 1 [NADH], chloroplastic 
 bdi-r.1   100832857   glutamate synthase 1 [NADH], chloroplastic 
 bdi-r.1   100844360   glutamate synthase 2 [NADH], chloroplastic 
 ath-u.5   GLT1   NADH-dependent glutamate synthase 1 
 gma-u.5   100819513   glutamate synthase [NADH], amyloplastic 
 gma-u.5   100815931   glutamate synthase [NADH], amyloplastic 
 gma-u.5   100809905   glutamate synthase [NADH], amyloplastic 
 sly-u.5   101254281   glutamate synthase 1 [NADH], chloroplastic 
 bra-r.6   103857079   glutamate synthase 1 [NADH], chloroplastic 
 vvi-u.5   100246868   glutamate synthase [NADH], amyloplastic 
 ppo-u.5   18103637   glutamate synthase [NADH], amyloplastic 
 ppo-u.5   7453835   glutamate synthase [NADH], amyloplastic 
 mtr-u.5   25482265   glutamate synthase [NADH], amyloplastic 
 ghi-r.1   107929529   glutamate synthase [NADH], amyloplastic 
 ghi-r.1   107947250   glutamate synthase [NADH], amyloplastic 
 bna-r.1   106387482   glutamate synthase 1 [NADH], chloroplastic 
 bna-r.1   111213076   glutamate synthase 1 [NADH], chloroplastic 
 sot-r.1   102580516   glutamate synthase 1 [NADH], chloroplastic 
 cit-r.1   102620225   glutamate synthase [NADH], amyloplastic 
 nta-r.1   107822887   glutamate synthase 1 [NADH], chloroplastic 
 nta-r.1   107809098   glutamate synthase 1 [NADH], chloroplastic-like 
 cre-r.1   CHLRE_13g592200v5   uncharacterized protein 

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Top 50 coexpressed genes to 103651348 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103651348 (zma-u.5 coexpression data)

CoexMap"103651348"


zmaLOC103651348 | Entrez gene ID : 103651348      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 3 1 2 1 3 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00250 [list] [network] Alanine, aspartate and glutamate metabolism (67 genes)
zma00910 [list] [network] Nitrogen metabolism (43 genes)
zma01230 [list] [network] Biosynthesis of amino acids (293 genes)
GO BP
GO:0006537 [list] [network] glutamate biosynthetic process  (10 genes)  IEA  
GO CC
GO MF
GO:0016639 [list] [network] oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor  (6 genes)  IEA  
GO:0016040 [list] [network] glutamate synthase (NADH) activity  (8 genes)  IEA  
GO:0010181 [list] [network] FMN binding  (42 genes)  IEA  
GO:0051536 [list] [network] iron-sulfur cluster binding  (111 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (174 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (373 genes)  IEA  
Protein XP_008675191.1 [sequence] [blastp]
XP_020406100.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_008675191.1)
chlo 4,  cyto 2,  nucl 1,  mito 1,  pero 1  (predict for XP_020406100.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_008675191.1)
other 6  (predict for XP_020406100.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103651348
zma-r.6
for
103651348
zma-m.5
for
103651348
zma-u.5
for
103636185
sbi-r.1
for
8068026
sbi-r.1
for
8074568
osa-u.5
for
4324398
osa-u.5
for
4339561
tae-r.2
for
123061864
tae-r.2
for
123070558
tae-r.2
for
123078967
hvu-r.1
for
123444122
bdi-r.1
for
100832857
bdi-r.1
for
100844360
ath-u.5
for
GLT1
gma-u.5
for
100819513
gma-u.5
for
100815931
gma-u.5
for
100809905
sly-u.5
for
101254281
bra-r.6
for
103857079
vvi-u.5
for
100246868
ppo-u.5
for
18103637
ppo-u.5
for
7453835
mtr-u.5
for
25482265
ghi-r.1
for
107929529
ghi-r.1
for
107947250
bna-r.1
for
106387482
bna-r.1
for
111213076
sot-r.1
for
102580516
cit-r.1
for
102620225
nta-r.1
for
107822887
nta-r.1
for
107809098
cre-r.1
for
CHLRE_13g592200v5


Ortholog ID: 6682
Species zma zma sbi sbi osa osa tae tae tae hvu bdi bdi ath gma gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC103651348 LOC103636185 LOC8068026 LOC8074568 LOC4324398 LOC4339561 LOC123061864 LOC123070558 LOC123078967 LOC123444122 LOC100832857 LOC100844360 GLT1 LOC100819513 LOC100815931 LOC100784900 LOC101254281 LOC103857079 LOC100246868 LOC18103637 LOC7453835 LOC25482265 LOC107929529 LOC107947250 LOC106387482 LOC111213076 LOC102580516 LOC102620225 LOC107822887 LOC107809098 CHLRE_13g592200v5
Function* glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 2 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic-like glutamate synthase 2 [NADH], chloroplastic-like glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 2 [NADH], chloroplastic NADH-dependent glutamate synthase 1 glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase [NADH], amyloplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase [NADH], amyloplastic glutamate synthase 1 [NADH], chloroplastic glutamate synthase 1 [NADH], chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00920 Sulfur metabolism 3
zma00061 Fatty acid biosynthesis 3
zma00620 Pyruvate metabolism 3
zma01212 Fatty acid metabolism 3
zma00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 3
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 3
sbi01200 Carbon metabolism 3
sbi00195 Photosynthesis 3
sbi00480 Glutathione metabolism 2
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa01200 Carbon metabolism 6
osa00260 Glycine, serine and threonine metabolism 3
osa00270 Cysteine and methionine metabolism 3
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 13
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00910 Nitrogen metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 13
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00910 Nitrogen metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 13
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00910 Nitrogen metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 6
hvu00010 Glycolysis / Gluconeogenesis 4
hvu00620 Pyruvate metabolism 3
hvu01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00564 Glycerophospholipid metabolism 2
bdi00565 Ether lipid metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00910 Nitrogen metabolism 5
ath00030 Pentose phosphate pathway 4
ath00010 Glycolysis / Gluconeogenesis 3
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 6
sly01200 Carbon metabolism 5
sly00010 Glycolysis / Gluconeogenesis 4
sly00710 Carbon fixation by Calvin cycle 3
sly00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00910 Nitrogen metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo00670 One carbon pool by folate 4
ppo00270 Cysteine and methionine metabolism 4
ppo00620 Pyruvate metabolism 3
ppo00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr01200 Carbon metabolism 4
mtr00195 Photosynthesis 3
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 8
bna01230 Biosynthesis of amino acids 8
bna00220 Arginine biosynthesis 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 8
bna01230 Biosynthesis of amino acids 8
bna00220 Arginine biosynthesis 6
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot01230 Biosynthesis of amino acids 5
sot00910 Nitrogen metabolism 4
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
cit04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00670 One carbon pool by folate 6
nta00999 Biosynthesis of various plant secondary metabolites 6
nta01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00670 One carbon pool by folate 6
nta00999 Biosynthesis of various plant secondary metabolites 6
nta01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
cre01200 Carbon metabolism 4
cre01230 Biosynthesis of amino acids 2
cre00030 Pentose phosphate pathway 2
cre00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103651348 103636185 8068026 8074568 4324398 4339561 123061864 123070558 123078967 123444122 100832857 100844360 835427 100819513 100815931 100784900 101254281 103857079 100246868 18103637 7453835 25482265 107929529 107947250 106387482 111213076 102580516 102620225 107822887 107809098 5718661
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