ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103653698	protein trichome birefringence-like 33
zma-r.6	103653698	protein trichome birefringence-like 33
zma-u.5	100275422	uncharacterized LOC100275422
zma-u.5	103629256	protein trichome birefringence-like 33
zma-u.5	100382326	putative DUF231 domain containing family protein
sbi-r.1	8084991	protein trichome birefringence-like 28
sbi-r.1	8084032	protein trichome birefringence-like 28
sbi-r.1	8076627	protein trichome birefringence-like 28
osa-u.5	4338512	protein trichome birefringence-like 28
osa-u.5	4351254	xylan O-acetyltransferase 3-like
osa-u.5	4349545	protein trichome birefringence-like 28
tae-r.2	123111415	protein trichome birefringence-like 28
tae-r.2	123181732	protein trichome birefringence-like 28
tae-r.2	123187340	protein trichome birefringence-like 28
hvu-r.1	123424601	protein trichome birefringence-like 28
hvu-r.1	123395529	protein trichome birefringence-like 28
hvu-r.1	123440990	protein trichome birefringence-like 28
bdi-r.1	100840217	protein trichome birefringence-like 28
bdi-r.1	100838848	protein trichome birefringence-like 28
bdi-r.1	100837935	protein trichome birefringence-like 28
ath-u.5	TBL28	TRICHOME BIREFRINGENCE-LIKE 28
ath-u.5	ESK1	trichome birefringence-like protein (DUF828)
gma-u.5	100785578	protein ESKIMO 1
gma-u.5	100785597	protein ESKIMO 1
gma-u.5	100789919	protein ESKIMO 1-like
sly-u.5	101250702	xylan O-acetyltransferase 1-like
sly-u.5	101260212	xylan O-acetyltransferase 1
bra-r.6	103830030	protein ESKIMO 1
bra-r.6	103857911	protein trichome birefringence-like 28
vvi-u.5	100243314	xylan O-acetyltransferase 1
ppo-u.5	7474426	xylan O-acetyltransferase 1
ppo-u.5	7474427	xylan O-acetyltransferase 1
mtr-u.5	11419934	protein ESKIMO 1
mtr-u.5	11419038	protein ESKIMO 1
ghi-r.1	107931261	protein ESKIMO 1
ghi-r.1	107899555	protein ESKIMO 1
ghi-r.1	107918821	protein ESKIMO 1
bna-r.1	106360812	xylan O-acetyltransferase 1
bna-r.1	106438039	protein trichome birefringence-like 28
bna-r.1	106368120	xylan O-acetyltransferase 1-like
sot-r.1	102595587	protein ESKIMO 1-like
sot-r.1	102604440	protein ESKIMO 1
cit-r.1	102626227	xylan O-acetyltransferase 1-like
nta-r.1	107807771	xylan O-acetyltransferase 1-like
nta-r.1	107801889	xylan O-acetyltransferase 1
nta-r.1	107793795	xylan O-acetyltransferase 1-like

Top 50 coexpressed genes to 103653698 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103653698 (zma-u.5 coexpression data)

CoexMap"103653698"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(572 genes)

IEA

GO MF

GO:0016413 [list] [network] O-acetyltransferase activity

(66 genes)

IEA

Protein

XP_020407759.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, plas 1, vacu 1, cyto_mito 1

(predict for XP_020407759.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_020407759.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103653698	zma-r.6 for 103653698	zma-u.5 for 100275422	zma-u.5 for 103629256	zma-u.5 for 100382326	sbi-r.1 for 8084991	sbi-r.1 for 8084032	sbi-r.1 for 8076627	osa-u.5 for 4338512	osa-u.5 for 4351254	osa-u.5 for 4349545	tae-r.2 for 123111415	tae-r.2 for 123181732	tae-r.2 for 123187340	hvu-r.1 for 123424601	hvu-r.1 for 123395529	hvu-r.1 for 123440990	bdi-r.1 for 100840217	bdi-r.1 for 100838848	bdi-r.1 for 100837935	ath-u.5 for TBL28	ath-u.5 for ESK1	gma-u.5 for 100785578	gma-u.5 for 100785597	gma-u.5 for 100789919	sly-u.5 for 101250702	sly-u.5 for 101260212	bra-r.6 for 103830030	bra-r.6 for 103857911	vvi-u.5 for 100243314	ppo-u.5 for 7474426	ppo-u.5 for 7474427	mtr-u.5 for 11419934	mtr-u.5 for 11419038	ghi-r.1 for 107931261	ghi-r.1 for 107899555	ghi-r.1 for 107918821	bna-r.1 for 106360812	bna-r.1 for 106438039	bna-r.1 for 106368120	sot-r.1 for 102595587	sot-r.1 for 102604440	cit-r.1 for 102626227	nta-r.1 for 107807771	nta-r.1 for 107801889	nta-r.1 for 107793795

Ortholog

Ortholog ID: 1169

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

TBL28

ESK1

Function^*

protein trichome birefringence-like 33

protein trichome birefringence-like 28

putative DUF231 domain containing family protein

protein trichome birefringence-like 28

xylan O-acetyltransferase 3-like

protein trichome birefringence-like 28

TRICHOME BIREFRINGENCE-LIKE 28

trichome birefringence-like protein (DUF828)

protein ESKIMO 1

protein ESKIMO 1-like

xylan O-acetyltransferase 1-like

xylan O-acetyltransferase 1

protein ESKIMO 1

protein trichome birefringence-like 28

xylan O-acetyltransferase 1

protein ESKIMO 1

xylan O-acetyltransferase 1-like

protein trichome birefringence-like 28

xylan O-acetyltransferase 1

protein ESKIMO 1-like

protein ESKIMO 1

xylan O-acetyltransferase 1-like

xylan O-acetyltransferase 1

xylan O-acetyltransferase 1-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	4
sbi00941	Flavonoid biosynthesis	2
sbi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04144	Endocytosis	2
osa00280	Valine, leucine and isoleucine degradation	2
osa00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	6
bdi04517	IgSF CAM signaling	6
bdi04814	Motor proteins	6
bdi00520	Amino sugar and nucleotide sugar metabolism	5
bdi01250	Biosynthesis of nucleotide sugars	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2
ath00053	Ascorbate and aldarate metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5
ghi00051	Fructose and mannose metabolism	2
ghi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00670	One carbon pool by folate	4
sot01200	Carbon metabolism	3
sot00260	Glycine, serine and threonine metabolism	2
sot00460	Cyanoamino acid metabolism	2
sot00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

103653698

103634496

100191843

8084032

8076627

8061888

4338512

4351254

4344387

123085577

123129145

123120508

123424601

123440990

123448910

100840217

100838848

100837935

818606

824765

100785578

100785597

100789919

101250702

101260212

103830030

103857911

100243314

7494503

7494505

11419934

11419038

107918894

107957303

107957307

106368120

106420567

106352903

102595587

102604440

102626227

107807771

107801889

107762195

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	3	3	3	3	2	3	2	2	1	2	2	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103653698 (zma-u.5 coexpression data)

Top 50 enrichment test to 103653698 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**