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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   PGN   polygalacturonase 
 mtr-u.5   25495857   probable polygalacturonase At3g15720 
 sly-u.5   PGcat   polygalacturonase 
 sly-u.5   101256371   probable polygalacturonase At3g15720 
 sot-r.1   102602941   probable polygalacturonase At3g15720 
 nta-r.1   107767548   putative polygalacturonase At3g15720 

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Top 50 coexpressed genes to PGN (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PGN (gma-u.5 coexpression data)

CoexMap"103827823"


braLOC103827823 | Entrez gene ID : 103827823    
Species gma mtr sly sot nta cre vvi bra ath ppo hvu bna tae bdi osa zma cit ghi sbi
Paralog 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00040 [list] [network] Pentose and glucuronate interconversions (191 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1073 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (106 genes)  IEA  
Protein XP_009101631.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  extr 2,  cyto_nucl 2,  chlo 1,  vacu 1,  nucl 1,  chlo_mito 1  (predict for XP_009101631.2)
Subcellular
localization
TargetP
scret 8,  mito 3  (predict for XP_009101631.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
PGN
mtr-u.5
for
25495857
sly-u.5
for
PGcat
sly-u.5
for
101256371
sot-r.1
for
102602941
nta-r.1
for
107767548


Ortholog ID: 2099
Species gma mtr sly sly sot nta nta nta tae
Symbol LOC100787465 LOC25495857 PGcat LOC101256371 LOC102602941 LOC107761023 LOC107776714 LOC107770857 LOC123049740
Function* probable polygalacturonase At1g80170 probable polygalacturonase At3g15720 polygalacturonase probable polygalacturonase At3g15720 probable polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 putative polygalacturonase At3g15720 polygalacturonase ADPG1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04142 Lysosome 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 3
sly01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 3
sot00061 Fatty acid biosynthesis 2
sot00780 Biotin metabolism 2
sot01240 Biosynthesis of cofactors 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787465 25495857 543587 101256371 102602941 107761023 107776714 107770857 123049740
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