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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103829303   COP9 signalosome complex subunit 5a 
 bra-r.6   103840816   COP9 signalosome complex subunit 5a 
 bna-r.1   106429794   COP9 signalosome complex subunit 5a 
 bna-r.1   106409978   COP9 signalosome complex subunit 5a 
 bna-r.1   106401214   COP9 signalosome complex subunit 5a 
 ath-u.5   CSN5A   COP9 signalosome 5A 
 ath-u.5   CSN5B   COP9-signalosome 5B 
 ghi-r.1   107902015   COP9 signalosome complex subunit 5b 
 ghi-r.1   107906771   COP9 signalosome complex subunit 5a 
 ghi-r.1   107937923   COP9 signalosome complex subunit 5a 
 cit-r.1   102629691   COP9 signalosome complex subunit 5a-like 
 gma-u.5   100784909   COP9 signalosome complex subunit 5a 
 vvi-u.5   100265887   COP9 signalosome complex subunit 5a 
 ppo-u.5   18100758   COP9 signalosome complex subunit 5a 
 ppo-u.5   7458739   COP9 signalosome complex subunit 5a 
 mtr-u.5   11433036   COP9 signalosome complex subunit 5a 
 mtr-u.5   25500020   COP9 signalosome complex subunit 5a 
 sly-u.5   csn5   COP9 signalosome complex subunit CSN5 
 sly-u.5   101256005   COP9 signalosome complex subunit 5a 
 sot-r.1   102588481   COP9 signalosome complex subunit 5b-like 
 sot-r.1   102602261   COP9 signalosome complex subunit 5b-like 
 nta-r.1   107774324   COP9 signalosome complex subunit 5a 
 nta-r.1   107760891   COP9 signalosome complex subunit 5a-like 
 osa-u.5   4337249   COP9 signalosome complex subunit 5-like 
 zma-u.5   100283276   COP9 signalosome complex subunit 5b 
 tae-r.2   123054875   COP9 signalosome complex subunit 5 
 tae-r.2   123190715   COP9 signalosome complex subunit 5 
 tae-r.2   123047047   COP9 signalosome complex subunit 5 
 hvu-r.1   123428089   COP9 signalosome complex subunit 5 
 sbi-r.1   110436531   COP9 signalosome complex subunit 5a-like 
 bdi-r.1   100841802   COP9 signalosome complex subunit 5a 
 cre-r.1   CHLRE_09g399178v5   uncharacterized protein 

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Top 50 coexpressed genes to 103829303 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103829303 (bra-r.6 coexpression data)

CoexMap"103829303"


braLOC103829303 | Entrez gene ID : 103829303    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 2 3 1 1 1 2 2 2 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000338 [list] [network] protein deneddylation  (9 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (20 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0019784 [list] [network] deNEDDylase activity  (4 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (127 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009103210.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_009103210.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009103210.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103829303
bra-r.6
for
103840816
bna-r.1
for
106429794
bna-r.1
for
106409978
bna-r.1
for
106401214
ath-u.5
for
CSN5A
ath-u.5
for
CSN5B
ghi-r.1
for
107902015
ghi-r.1
for
107906771
ghi-r.1
for
107937923
cit-r.1
for
102629691
gma-u.5
for
100784909
vvi-u.5
for
100265887
ppo-u.5
for
18100758
ppo-u.5
for
7458739
mtr-u.5
for
11433036
mtr-u.5
for
25500020
sly-u.5
for
csn5
sly-u.5
for
101256005
sot-r.1
for
102588481
sot-r.1
for
102602261
nta-r.1
for
107774324
nta-r.1
for
107760891
osa-u.5
for
4337249
zma-u.5
for
100283276
tae-r.2
for
123054875
tae-r.2
for
123190715
tae-r.2
for
123047047
hvu-r.1
for
123428089
sbi-r.1
for
110436531
bdi-r.1
for
100841802
cre-r.1
for
CHLRE_09g399178v5


Ortholog ID: 7044
Species bra bra bna bna bna ath ath ghi ghi ghi cit gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103829303 LOC103840816 LOC106429794 LOC106409978 LOC106401214 CSN5A CSN5B LOC107902015 LOC107906771 LOC107937923 LOC102629691 LOC100784909 LOC100265887 LOC18100758 LOC7458739 LOC11433036 LOC25500020 csn5 LOC101256005 LOC102588481 LOC102602261 LOC107774324 LOC107760891 LOC4337249 LOC100283276 LOC123054875 LOC123190715 LOC123047047 LOC123428089 LOC110436531 LOC100841802 CHLRE_09g399178v5
Function* COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome 5A COP9-signalosome 5B COP9 signalosome complex subunit 5b COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a-like COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a COP9 signalosome complex subunit CSN5 COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5b-like COP9 signalosome complex subunit 5b-like COP9 signalosome complex subunit 5a COP9 signalosome complex subunit 5a-like COP9 signalosome complex subunit 5-like COP9 signalosome complex subunit 5b COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 5a-like COP9 signalosome complex subunit 5a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 10
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03050 Proteasome 4
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00020 Citrate cycle (TCA cycle) 6
ghi00640 Propanoate metabolism 5
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00020 Citrate cycle (TCA cycle) 6
ghi00640 Propanoate metabolism 5
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00190 Oxidative phosphorylation 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03010 Ribosome 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03050 Proteasome 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly04141 Protein processing in endoplasmic reticulum 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103829303 103840816 106429794 106409978 106401214 838899 843463 107902015 107906771 107937923 102629691 100784909 100265887 18100758 7458739 11433036 25500020 543616 101256005 102588481 102602261 107774324 107760891 4337249 100283276 123054875 123190715 123047047 123428089 110436531 100841802 5720391
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