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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103834090   periodic tryptophan protein 1 homolog 
 bra-r.6   103856920   periodic tryptophan protein 1 homolog 
 bna-r.1   106430886   periodic tryptophan protein 1 homolog 
 bna-r.1   106419592   uncharacterized WD repeat-containing protein C17D11.16-like 
 ath-u.5   AT4G18905   Transducin/WD40 repeat-like superfamily protein 
 ghi-r.1   107959604   uncharacterized WD repeat-containing protein C17D11.16 
 ghi-r.1   107959476   uncharacterized WD repeat-containing protein C17D11.16 
 cit-r.1   102621744   uncharacterized WD repeat-containing protein C17D11.16 
 gma-u.5   100800393   WD40 repeat-containing protein 
 gma-u.5   100807947   uncharacterized WD repeat-containing protein C17D11.16 
 vvi-u.5   100257466   uncharacterized WD repeat-containing protein C17D11.16 
 ppo-u.5   18109816   uncharacterized LOC18109816 
 mtr-u.5   11421055   uncharacterized WD repeat-containing protein C17D11.16 
 sly-u.5   101253680   uncharacterized WD repeat-containing protein C17D11.16 
 nta-r.1   107830338   uncharacterized LOC107830338 
 nta-r.1   107784045   uncharacterized LOC107784045 
 nta-r.1   107767649   uncharacterized LOC107767649 
 osa-u.5   4327260   uncharacterized WD repeat-containing protein C17D11.16 
 zma-u.5   100286183   uncharacterized LOC100286183 
 tae-r.2   123183303   periodic tryptophan protein 1 homolog 
 tae-r.2   123148910   uncharacterized WD repeat-containing protein C17D11.16 
 hvu-r.1   123445273   uncharacterized WD repeat-containing protein C17D11.16-like 
 hvu-r.1   123452161   periodic tryptophan protein 1 homolog 
 sbi-r.1   8079819   uncharacterized WD repeat-containing protein C17D11.16 
 bdi-r.1   100827658   uncharacterized WD repeat-containing protein C17D11.16 
 cre-r.1   CHLRE_01g035000v5   uncharacterized protein 

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Top 50 coexpressed genes to 103834090 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103834090 (bra-r.6 coexpression data)

CoexMap"103834090"


braLOC103834090 | Entrez gene ID : 103834090    
Species bra bna ath ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 2 2 1 2 1 2 1 1 1 1 3 1 1 2 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (309 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033133269.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for XP_033133269.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for XP_033133269.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103834090
bra-r.6
for
103856920
bna-r.1
for
106430886
bna-r.1
for
106419592
ath-u.5
for
AT4G18905
ghi-r.1
for
107959604
ghi-r.1
for
107959476
cit-r.1
for
102621744
gma-u.5
for
100800393
gma-u.5
for
100807947
vvi-u.5
for
100257466
ppo-u.5
for
18109816
mtr-u.5
for
11421055
sly-u.5
for
101253680
nta-r.1
for
107830338
nta-r.1
for
107784045
nta-r.1
for
107767649
osa-u.5
for
4327260
zma-u.5
for
100286183
tae-r.2
for
123183303
tae-r.2
for
123148910
hvu-r.1
for
123445273
hvu-r.1
for
123452161
sbi-r.1
for
8079819
bdi-r.1
for
100827658
cre-r.1
for
CHLRE_01g035000v5


Ortholog ID: 5344
Species bra bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly nta nta nta osa zma tae tae hvu hvu sbi bdi cre
Symbol LOC103834090 LOC103856920 LOC106419592 LOC106423194 AT4G18905 LOC107959604 LOC107959476 LOC102621744 LOC100800393 LOC100807947 LOC100257466 LOC18109816 LOC11421055 LOC101253680 LOC107830338 LOC107767649 LOC107797017 LOC4327260 LOC100286183 LOC123148910 LOC123069988 LOC123445273 LOC123452161 LOC8079819 LOC100827658 CHLRE_01g035000v5
Function* periodic tryptophan protein 1 homolog periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16-like periodic tryptophan protein 1 homolog Transducin/WD40 repeat-like superfamily protein uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 WD40 repeat-containing protein uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC18109816 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC107830338 uncharacterized LOC107767649 uncharacterized LOC107797017 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC100286183 uncharacterized WD repeat-containing protein C17D11.16 periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16-like periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103834090 103856920 106419592 106423194 827625 107959604 107959476 102621744 100800393 100807947 100257466 18109816 11421055 101253680 107830338 107767649 107797017 4327260 100286183 123148910 123069988 123445273 123452161 8079819 100827658 5715451
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