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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g035000v5   uncharacterized protein 
 ath-u.5   AT4G18905   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100807947   uncharacterized WD repeat-containing protein C17D11.16 
 gma-u.5   100800393   WD40 repeat-containing protein 
 sly-u.5   101253680   uncharacterized WD repeat-containing protein C17D11.16 
 osa-u.5   4327260   uncharacterized WD repeat-containing protein C17D11.16 
 zma-u.5   100286183   uncharacterized LOC100286183 
 vvi-u.5   100257466   uncharacterized WD repeat-containing protein C17D11.16 
 ppo-u.5   18109816   uncharacterized LOC18109816 
 mtr-u.5   11421055   uncharacterized WD repeat-containing protein C17D11.16 

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Top 50 coexpressed genes to CHLRE_01g035000v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g035000v5 (cre-r.1 coexpression data)

CoexMap"5715451"


creCHLRE_01g035000v5 | Entrez gene ID : 5715451      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (218 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042928619.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1  (predict for XP_042928619.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_042928619.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g035000v5

.
ath-u.5
for
AT4G18905

.
gma-u.5
for
100807947

.
gma-u.5
for
100800393

.
sly-u.5
for
101253680

.
osa-u.5
for
4327260

.
zma-u.5
for
100286183

.
vvi-u.5
for
100257466

.
ppo-u.5
for
18109816

.
mtr-u.5
for
11421055

.


Ortholog ID: 5344
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna cre sbi cit bdi nta nta
Symbol AT4G18905 LOC100807947 LOC100800393 LOC101253680 LOC4327260 LOC100286183 LOC103856920 LOC103834090 LOC100257466 LOC18109816 LOC11421055 LOC123069988 LOC123148910 LOC123452161 LOC123445273 LOC107959604 LOC107959476 LOC106419592 CHLRE_01g035000v5 LOC8079819 LOC102621744 LOC100827658 LOC107797017 LOC107830338
Function* Transducin/WD40 repeat-like superfamily protein uncharacterized WD repeat-containing protein C17D11.16 WD40 repeat-containing protein uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC100286183 periodic tryptophan protein 1 homolog periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC18109816 uncharacterized WD repeat-containing protein C17D11.16 periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16 periodic tryptophan protein 1 homolog uncharacterized WD repeat-containing protein C17D11.16-like uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16-like uncharacterized protein uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized WD repeat-containing protein C17D11.16 uncharacterized LOC107797017 uncharacterized LOC107830338
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827625 100807947 100800393 101253680 4327260 100286183 103856920 103834090 100257466 18109816 11421055 123069988 123148910 123452161 123445273 107959604 107959476 106419592 5715451 8079819 102621744 100827658 107797017 107830338
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