ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103834100	cyclin-dependent kinase F-4
bra-r.6	103839657	cyclin-dependent kinase F-4
bra-r.6	103828365	serine/threonine-protein kinase MHK
bna-r.1	106386415	cyclin-dependent kinase F-4
bna-r.1	106419727	cyclin-dependent kinase F-4
bna-r.1	111207445	cyclin-dependent kinase F-4
ath-u.5	MHK	Protein kinase superfamily protein
ath-u.5	AT4G19110	Protein kinase superfamily protein
ath-u.5	AT5G45430	Protein kinase superfamily protein
ghi-r.1	107924266	serine/threonine-protein kinase MHK
ghi-r.1	107929445	cyclin-dependent kinase F-4
ghi-r.1	107954961	serine/threonine-protein kinase MHK
cit-r.1	102624957	cyclin-dependent kinase F-4
gma-u.5	100819558	cyclin-dependent kinase F-4
gma-u.5	100784474	cyclin-dependent kinase F-4
gma-u.5	100804781	serine/threonine-protein kinase MHK
vvi-u.5	100241542	serine/threonine-protein kinase MHK
vvi-u.5	104882706	cyclin-dependent kinase F-4
ppo-u.5	7465471	cyclin-dependent kinase F-4
ppo-u.5	7462814	cyclin-dependent kinase F-4
ppo-u.5	7471169	serine/threonine-protein kinase MHK
mtr-u.5	11434489	serine/threonine-protein kinase MHK
mtr-u.5	25501566	cyclin-dependent kinase F-4
mtr-u.5	11426323	cyclin-dependent kinase F-4
sly-u.5	101255019	cyclin-dependent kinase F-4-like
sly-u.5	101252911	cyclin-dependent kinase F-4
sly-u.5	101245779	cyclin-dependent kinase F-4
sot-r.1	102582273	cyclin-dependent kinase F-4-like
sot-r.1	102605817	cyclin-dependent kinase F-4
sot-r.1	102600358	cyclin-dependent kinase F-4-like
nta-r.1	107791635	cyclin-dependent kinase F-4-like
nta-r.1	107781521	serine/threonine-protein kinase MHK-like
nta-r.1	107762407	serine/threonine-protein kinase MHK
osa-u.5	4330434	cyclin-dependent kinase F-4-like
osa-u.5	4334774	cyclin-dependent kinase F-3-like
osa-u.5	4339927	cyclin-dependent kinase F-4-like
zma-u.5	100381504	putative protein kinase superfamily protein
zma-u.5	100192489	putative protein kinase superfamily protein
zma-u.5	100272250	putative protein kinase superfamily protein
tae-r.2	123137887	cyclin-dependent kinase F-4
tae-r.2	123087636	cyclin-dependent kinase F-3
tae-r.2	123088275	cyclin-dependent kinase F-4
hvu-r.1	123395078	cyclin-dependent kinase F-3
hvu-r.1	123406239	cyclin-dependent kinase F-4-like
hvu-r.1	123411565	cyclin-dependent kinase F-4-like
sbi-r.1	110431890	cyclin-dependent kinase F-3
sbi-r.1	8066914	cyclin-dependent kinase F-4
sbi-r.1	8073873	cyclin-dependent kinase F-4
bdi-r.1	100824159	cyclin-dependent kinase F-3
bdi-r.1	100841845	cyclin-dependent kinase F-4
bdi-r.1	100842580	cyclin-dependent kinase F-4
cre-r.1	CHLRE_16g661100v5	uncharacterized protein

Top 50 coexpressed genes to 103834100 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103834100 (bra-r.6 coexpression data)

CoexMap"103834100"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0035556 [list] [network] intracellular signal transduction	(519 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1628 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(4801 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(7940 genes)	IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(496 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2916 genes)	IEA

Protein

XP_009108408.1 [sequence] [blastp]
XP_009108409.1 [sequence] [blastp]
XP_009108410.1 [sequence] [blastp]
XP_033133291.1 [sequence] [blastp]
XP_033133292.1 [sequence] [blastp]
XP_033133293.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, chlo 1, mito 1, vacu 1, chlo_mito 1	(predict for XP_009108408.1)
nucl 6, cyto 2, chlo 1, vacu 1	(predict for XP_009108409.1)
nucl 6, cyto 2, chlo 1, vacu 1	(predict for XP_009108410.1)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for XP_033133291.1)
nucl 5, cyto 4, vacu 1, pero 1	(predict for XP_033133292.1)
nucl 5, cyto 4, vacu 1, pero 1	(predict for XP_033133293.1)

Subcellular
localization
TargetP

other 9	(predict for XP_009108408.1)
other 9	(predict for XP_009108409.1)
other 9	(predict for XP_009108410.1)
other 9	(predict for XP_033133291.1)
other 9	(predict for XP_033133292.1)
other 9	(predict for XP_033133293.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103834100	bra-r.6 for 103839657	bra-r.6 for 103828365	bna-r.1 for 106386415	bna-r.1 for 106419727	bna-r.1 for 111207445	ath-u.5 for MHK	ath-u.5 for AT4G19110	ath-u.5 for AT5G45430	ghi-r.1 for 107924266	ghi-r.1 for 107929445	ghi-r.1 for 107954961	cit-r.1 for 102624957	gma-u.5 for 100819558	gma-u.5 for 100784474	gma-u.5 for 100804781	vvi-u.5 for 100241542	vvi-u.5 for 104882706	ppo-u.5 for 7465471	ppo-u.5 for 7462814	ppo-u.5 for 7471169	mtr-u.5 for 11434489	mtr-u.5 for 25501566	mtr-u.5 for 11426323	sly-u.5 for 101255019	sly-u.5 for 101252911	sly-u.5 for 101245779	sot-r.1 for 102582273	sot-r.1 for 102605817	sot-r.1 for 102600358	nta-r.1 for 107791635	nta-r.1 for 107781521	nta-r.1 for 107762407	osa-u.5 for 4330434	osa-u.5 for 4334774	osa-u.5 for 4339927	zma-u.5 for 100381504	zma-u.5 for 100192489	zma-u.5 for 100272250	tae-r.2 for 123137887	tae-r.2 for 123087636	tae-r.2 for 123088275	hvu-r.1 for 123395078	hvu-r.1 for 123406239	hvu-r.1 for 123411565	sbi-r.1 for 110431890	sbi-r.1 for 8066914	sbi-r.1 for 8073873	bdi-r.1 for 100824159	bdi-r.1 for 100841845	bdi-r.1 for 100842580	cre-r.1 for CHLRE_16g661100v5

Ortholog

Ortholog ID: 1087

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

MHK

Function^*