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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103836020   ATP synthase gamma chain 2, chloroplastic 
 bra-r.6   103839821   ATP synthase gamma chain 1, chloroplastic 
 bra-r.6   103858669   ATP synthase gamma chain 1, chloroplastic 
 bra-r.6   103868164   ATP synthase gamma chain 1, chloroplastic 
 bna-r.1   106446624   ATP synthase gamma chain 1, chloroplastic 
 bna-r.1   106438750   ATP synthase gamma chain 1, chloroplastic 
 bna-r.1   106430073   ATP synthase gamma chain 1, chloroplastic-like 
 ath-u.5   ATPC1   ATPase, F1 complex, gamma subunit protein 
 ghi-r.1   107901956   ATP synthase gamma chain, chloroplastic 
 ghi-r.1   121213828   ATP synthase gamma chain, chloroplastic 
 ghi-r.1   107917896   ATP synthase gamma chain, chloroplastic 
 cit-r.1   102629991   ATP synthase gamma chain, chloroplastic 
 cit-r.1   102628129   ATP synthase gamma chain 1, chloroplastic 
 gma-u.5   100797290   ATP synthase gamma chain, chloroplastic 
 gma-u.5   ATPC   ATP synthase gamma chain, chloroplastic 
 vvi-u.5   100264091   ATP synthase gamma chain, chloroplastic 
 vvi-u.5   100258958   ATP synthase gamma chain 1, chloroplastic 
 ppo-u.5   112325759   ATP synthase gamma chain, chloroplastic 
 ppo-u.5   7485426   ATP synthase gamma chain, chloroplastic 
 mtr-u.5   11428261   ATP synthase gamma chain 2, chloroplastic 
 mtr-u.5   25481739   ATP synthase gamma chain, chloroplastic 
 sly-u.5   101257833   ATP synthase gamma chain, chloroplastic-like 
 sly-u.5   101253342   ATP synthase gamma chain, chloroplastic 
 sot-r.1   102603946   ATP synthase gamma chain, chloroplastic-like 
 sot-r.1   102596547   ATP synthase gamma chain, chloroplastic 
 nta-r.1   107818045   ATP synthase gamma chain, chloroplastic-like 
 nta-r.1   107792409   ATP synthase gamma chain, chloroplastic-like 
 nta-r.1   107773060   ATP synthase gamma chain, chloroplastic-like 
 osa-u.5   4343366   ATP synthase subunit gamma, chloroplastic 
 zma-u.5   100284505   ATP synthase chloroplast subunit2 
 tae-r.2   123052557   ATP synthase subunit gamma, chloroplastic 
 tae-r.2   123044694   ATP synthase subunit gamma, chloroplastic 
 tae-r.2   100359391   ATP synthase subunit 
 hvu-r.1   123425909   ATP synthase subunit gamma, chloroplastic 
 sbi-r.1   110432281   ATP synthase subunit gamma, chloroplastic 
 bdi-r.1   100824663   ATP synthase subunit gamma, chloroplastic 
 cre-r.1   CHLRE_06g259900v5   uncharacterized protein 

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Top 50 coexpressed genes to 103836020 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103836020 (bra-r.6 coexpression data)

CoexMap"103836020"


braLOC103836020 | Entrez gene ID : 103836020    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 3 2 2 2 2 2 2 2 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00190 [list] [network] Oxidative phosphorylation (276 genes)
brp00195 [list] [network] Photosynthesis (127 genes)
GO BP
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (41 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (141 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (32 genes)  IEA  
Protein XP_009110475.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_009110475.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_009110475.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103836020
bra-r.6
for
103839821
bra-r.6
for
103858669
bra-r.6
for
103868164
bna-r.1
for
106446624
bna-r.1
for
106438750
bna-r.1
for
106430073
ath-u.5
for
ATPC1
ghi-r.1
for
107901956
ghi-r.1
for
121213828
ghi-r.1
for
107917896
cit-r.1
for
102629991
cit-r.1
for
102628129
gma-u.5
for
100797290
gma-u.5
for
ATPC
vvi-u.5
for
100264091
vvi-u.5
for
100258958
ppo-u.5
for
112325759
ppo-u.5
for
7485426
mtr-u.5
for
11428261
mtr-u.5
for
25481739
sly-u.5
for
101257833
sly-u.5
for
101253342
sot-r.1
for
102603946
sot-r.1
for
102596547
nta-r.1
for
107818045
nta-r.1
for
107792409
nta-r.1
for
107773060
osa-u.5
for
4343366
zma-u.5
for
100284505
tae-r.2
for
123052557
tae-r.2
for
123044694
tae-r.2
for
100359391
hvu-r.1
for
123425909
sbi-r.1
for
110432281
bdi-r.1
for
100824663
cre-r.1
for
CHLRE_06g259900v5


Ortholog ID: 4259
Species bra bra bra bna bna bna ath ghi ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103836020 LOC103839821 LOC103868164 LOC106446624 LOC106438750 LOC106403328 ATPC1 LOC107901956 LOC121213828 LOC107917896 LOC102629991 LOC102628129 LOC100797290 ATPC LOC100264091 LOC100258958 LOC112325759 LOC7485426 LOC11428261 LOC25481739 LOC101257833 LOC101253342 LOC102603946 LOC102596547 LOC107818045 LOC107792409 LOC107813955 LOC4343366 LOC100284505 LOC123052557 LOC123044694 LOC100359391 LOC123425909 LOC110432281 LOC100824663 CHLRE_06g259900v5
Function* ATP synthase gamma chain 2, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain 2, chloroplastic-like ATPase, F1 complex, gamma subunit protein ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 1, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain 2, chloroplastic ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic-like ATP synthase gamma chain, chloroplastic-like ATP synthase subunit gamma, chloroplastic ATP synthase chloroplast subunit2 ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase subunit ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra01230 Biosynthesis of amino acids 3
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 13
bra00190 Oxidative phosphorylation 3
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
bra00190 Oxidative phosphorylation 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath01200 Carbon metabolism 3
ath00190 Oxidative phosphorylation 3
ath00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00190 Oxidative phosphorylation 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit00196 Photosynthesis - antenna proteins 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma00030 Pentose phosphate pathway 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00195 Photosynthesis 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00195 Photosynthesis 6
ppo00710 Carbon fixation by Calvin cycle 5
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo00300 Lysine biosynthesis 2
ppo00470 D-Amino acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 12
sly00710 Carbon fixation by Calvin cycle 10
sly00030 Pentose phosphate pathway 4
sly01230 Biosynthesis of amino acids 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 10
nta01200 Carbon metabolism 10
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 9
nta01200 Carbon metabolism 9
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00195 Photosynthesis 3
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 11
osa00190 Oxidative phosphorylation 3
osa00710 Carbon fixation by Calvin cycle 3
osa01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 6
zma01200 Carbon metabolism 6
zma01230 Biosynthesis of amino acids 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
tae00190 Oxidative phosphorylation 9
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 15
tae00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
tae00190 Oxidative phosphorylation 9
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 8
hvu00710 Carbon fixation by Calvin cycle 5
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00260 Glycine, serine and threonine metabolism 3
hvu00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi01240 Biosynthesis of cofactors 3
sbi00190 Oxidative phosphorylation 2
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi00195 Photosynthesis 3
bdi00190 Oxidative phosphorylation 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00195 Photosynthesis 5
cre00630 Glyoxylate and dicarboxylate metabolism 4
cre00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103836020 103839821 103868164 106446624 106438750 106403328 825797 107901956 121213828 107917896 102629991 102628129 100797290 100037480 100264091 100258958 112325759 7485426 11428261 25481739 101257833 101253342 102603946 102596547 107818045 107792409 107813955 4343366 100284505 123052557 123044694 100359391 123425909 110432281 100824663 5722055
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