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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103837222   homeobox protein HAT3.1 
 bra-r.6   103869447   homeobox protein HAT3.1 
 bna-r.1   106377210   homeobox protein HAT3.1 
 bna-r.1   125609565   homeobox protein HAT3.1-like 
 bna-r.1   106346600   homeobox protein HAT3.1 
 ath-u.5   HAT3.1   Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein 
 ghi-r.1   121215965   homeobox protein HAT3.1 
 ghi-r.1   107945144   homeobox protein HAT3.1 
 ghi-r.1   107935031   homeobox protein HAT3.1 
 cit-r.1   102620589   homeobox protein HAT3.1 
 gma-u.5   100811458   homeobox protein HAT3.1 
 gma-u.5   100306715   homeobox protein HAT3.1 
 vvi-u.5   100254410   homeobox protein HAT3.1 
 ppo-u.5   7465051   homeobox protein HAT3.1 
 ppo-u.5   7469609   homeobox protein HAT3.1 
 mtr-u.5   25485369   homeobox protein HAT3.1 
 sly-u.5   101247266   PHD-finger family homeodomain protein 
 sot-r.1   102596310   pathogenesis-related homeodomain protein 
 nta-r.1   107807352   pathogenesis-related homeodomain protein 
 nta-r.1   107800140   pathogenesis-related homeodomain protein 
 nta-r.1   107782980   pathogenesis-related homeodomain protein 
 osa-u.5   4340565   homeobox protein HAZ1-like 
 zma-u.5   542406   Zmhox1a homeobox protein 
 zma-u.5   103631611   uncharacterized LOC103631611 
 zma-u.5   542440   homeobox 3 
 tae-r.2   123079020   homeobox protein HAZ1 
 tae-r.2   123070616   homeobox protein HAZ1 
 tae-r.2   123140265   homeobox protein HOX1A 
 hvu-r.1   123447070   homeobox protein HOX1A-like 
 hvu-r.1   123444399   homeobox protein HAZ1-like 
 sbi-r.1   8067527   homeobox protein HOX1A 
 sbi-r.1   8075570   uncharacterized LOC8075570 
 bdi-r.1   100827663   homeobox protein HOX1A 
 bdi-r.1   100833579   homeobox protein HAZ1 
 cre-r.1   CHLRE_12g492200v5   uncharacterized protein 

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Top 50 coexpressed genes to 103837222 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103837222 (bra-r.6 coexpression data)

CoexMap"103837222"


braLOC103837222 | Entrez gene ID : 103837222    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 2 1 2 1 1 1 3 1 3 3 2 2 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006325 [list] [network] chromatin organization  (202 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (186 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
Protein XP_009111807.2 [sequence] [blastp]
XP_009111814.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for XP_009111807.2)
nucl 8,  mito 1  (predict for XP_009111814.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_009111807.2)
mito 4,  other 3  (predict for XP_009111814.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103837222
bra-r.6
for
103869447
bna-r.1
for
106377210
bna-r.1
for
125609565
bna-r.1
for
106346600
ath-u.5
for
HAT3.1
ghi-r.1
for
121215965
ghi-r.1
for
107945144
ghi-r.1
for
107935031
cit-r.1
for
102620589
gma-u.5
for
100811458
gma-u.5
for
100306715
vvi-u.5
for
100254410
ppo-u.5
for
7465051
ppo-u.5
for
7469609
mtr-u.5
for
25485369
sly-u.5
for
101247266
sot-r.1
for
102596310
nta-r.1
for
107807352
nta-r.1
for
107800140
nta-r.1
for
107782980
osa-u.5
for
4340565
zma-u.5
for
542406
zma-u.5
for
103631611
zma-u.5
for
542440
tae-r.2
for
123079020
tae-r.2
for
123070616
tae-r.2
for
123140265
hvu-r.1
for
123447070
hvu-r.1
for
123444399
sbi-r.1
for
8067527
sbi-r.1
for
8075570
bdi-r.1
for
100827663
bdi-r.1
for
100833579
cre-r.1
for
CHLRE_12g492200v5


Ortholog ID: 3581
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC103837222 LOC103869447 LOC125609565 LOC106346600 LOC106435647 HAT3.1 LOC107935031 LOC107908867 LOC102620589 LOC100811458 LOC100306715 LOC100254410 LOC7465051 LOC7469609 LOC25485369 LOC101247266 LOC102596310 LOC107807352 LOC107800140 LOC107782980 LOC4340565 LOC542406 LOC542536 LOC732843 LOC123063331 LOC123182651 LOC123447070 LOC123444399 LOC8067527 LOC8075570 LOC100827663 LOC100833579 CHLRE_12g492200v5
Function* homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1-like homeobox protein HAT3.1 homeobox protein HAT3.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 homeobox protein HAT3.1 PHD-finger family homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein pathogenesis-related homeodomain protein homeobox protein HAZ1-like Zmhox1a homeobox protein uncharacterized LOC542536 HOX1B protein homeobox protein HOX1A homeobox protein HOX1A homeobox protein HOX1A-like homeobox protein HAZ1-like homeobox protein HOX1A uncharacterized LOC8075570 homeobox protein HOX1A homeobox protein HAZ1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00220 Arginine biosynthesis 2
sly00250 Alanine, aspartate and glutamate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta03250 Viral life cycle - HIV-1 2
nta03015 mRNA surveillance pathway 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03015 mRNA surveillance pathway 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 4
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103837222 103869447 125609565 106346600 106435647 821485 107935031 107908867 102620589 100811458 100306715 100254410 7465051 7469609 25485369 101247266 102596310 107807352 107800140 107782980 4340565 542406 542536 732843 123063331 123182651 123447070 123444399 8067527 8075570 100827663 100833579 5726138
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