ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	8067527	homeobox protein HOX1A
zma-u.5	732843	HOX1B protein
zma-u.5	103631611	uncharacterized LOC103631611
zma-u.5	542536	uncharacterized LOC542536
osa-u.5	4340565	homeobox protein HAZ1-like
ath-u.5	HAT3.1	Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein
gma-u.5	100306715	homeobox protein HAT3.1
gma-u.5	100811458	homeobox protein HAT3.1
sly-u.5	101247266	PHD-finger family homeodomain protein
vvi-u.5	100254410	homeobox protein HAT3.1
ppo-u.5	7465051	homeobox protein HAT3.1
ppo-u.5	7469609	homeobox protein HAT3.1
mtr-u.5	25485369	homeobox protein HAT3.1

functional annotation

KEGG

GO BP

GO:0006325 [list] [network] chromatin organization	(130 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1596 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2977 genes)

IEA

GO MF

GO:0003682 [list] [network] chromatin binding	(124 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1849 genes)	IEA

Protein

XP_002440088.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_002440088.2)

Subcellular
localization
TargetP

other 9

(predict for XP_002440088.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8067527	zma-u.5 for 732843	zma-u.5 for 103631611	zma-u.5 for 542536	osa-u.5 for 4340565	ath-u.5 for HAT3.1	gma-u.5 for 100306715	gma-u.5 for 100811458	sly-u.5 for 101247266	vvi-u.5 for 100254410	ppo-u.5 for 7465051	ppo-u.5 for 7469609	mtr-u.5 for 25485369

Ortholog ID: 3581

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HAT3.1

Function^*

uncharacterized LOC8075570

homeobox protein HOX1A

uncharacterized LOC542536

HOX1B protein

homeobox protein HAZ1-like

homeobox protein HOX1A

homeobox protein HOX1A-like

homeobox protein HAZ1-like

homeobox protein HOX1A

homeobox protein HAZ1

Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein

homeobox protein HAT3.1

PHD-finger family homeodomain protein

homeobox protein HAT3.1

homeobox protein HAT3.1-like

pathogenesis-related homeodomain protein

homeobox protein HAT3.1

pathogenesis-related homeodomain protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03082	ATP-dependent chromatin remodeling	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	4
sbi03040	Spliceosome	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00220	Arginine biosynthesis	2
sly00250	Alanine, aspartate and glutamate metabolism	2
sly00710	Carbon fixation by Calvin cycle	2
sly01200	Carbon metabolism	2
sly01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	6
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2
nta03015	mRNA surveillance pathway	2
nta03030	DNA replication	2

Expression

Expression pattern

Entrez Gene ID^*

8075570

8067527

542536

732843

4340565

123063331

123182651

123447070

123444399

100827663

100833579

821485

100306715

100811458

101247266

103869447

103837222

100254410

7469609

7465051

25485369

107908867

107935031

106435647

125609565

102596310

102620589

107782980

107800140

5726138

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 8067527 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8067527 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	ghi	sot	nta	cre	tae
Paralog	1	3	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 8067527 (sbi-r.1 coexpression data)

Top 50 enrichment test to 8067527 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**