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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103837478   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 bra-r.6   103873768   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 bna-r.1   106347925   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 bna-r.1   106410774   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 bna-r.1   106366203   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 ath-u.5   GSA2   glutamate-1-semialdehyde 2,1-aminomutase 2 
 ath-u.5   GSA1   glutamate-1-semialdehyde-2,1-aminomutase 
 ghi-r.1   121215506   glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 
 ghi-r.1   107953580   glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 
 cit-r.1   102627733   glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 
 gma-u.5   GSA1   glutamate 1-semialdehyde aminotransferase 
 gma-u.5   100790574   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 vvi-u.5   100250737   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 ppo-u.5   7456623   glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 
 mtr-u.5   11420447   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 sly-u.5   GSA-AT   glutamate 1-semialdehyde 2,1-aminomutase 
 sot-r.1   102593524   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 nta-r.1   107769957   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 nta-r.1   107815022   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 nta-r.1   142177521   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 osa-u.5   4346136   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 
 zma-u.5   100193482   Glutamate-1-semialdehyde 21-aminomutase 2 chloroplastic 
 tae-r.2   123164340   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 tae-r.2   123155954   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 tae-r.2   123151833   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 hvu-r.1   123407287   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 sbi-r.1   110430175   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 bdi-r.1   100845106   glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 
 cre-r.1   CHLRE_03g158000v5   uncharacterized protein 

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Top 50 coexpressed genes to 103837478 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103837478 (bra-r.6 coexpression data)

CoexMap"103837478"


braLOC103837478 | Entrez gene ID : 103837478    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 2 2 1 2 1 1 1 1 1 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00860 [list] [network] Porphyrin metabolism (77 genes)
brp01240 [list] [network] Biosynthesis of cofactors (357 genes)
GO BP
GO:0033014 [list] [network] tetrapyrrole biosynthetic process  (52 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (845 genes)  IEA  
GO MF
GO:0042286 [list] [network] glutamate-1-semialdehyde 2,1-aminomutase activity  (2 genes)  IEA  
GO:0008483 [list] [network] transaminase activity  (99 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (147 genes)  IEA  
Protein XP_009112088.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009112088.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_009112088.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103837478
bra-r.6
for
103873768
bna-r.1
for
106347925
bna-r.1
for
106410774
bna-r.1
for
106366203
ath-u.5
for
GSA2
ath-u.5
for
GSA1
ghi-r.1
for
121215506
ghi-r.1
for
107953580
cit-r.1
for
102627733
gma-u.5
for
GSA1
gma-u.5
for
100790574
vvi-u.5
for
100250737
ppo-u.5
for
7456623
mtr-u.5
for
11420447
sly-u.5
for
GSA-AT
sot-r.1
for
102593524
nta-r.1
for
107769957
nta-r.1
for
107815022
nta-r.1
for
142177521
osa-u.5
for
4346136
zma-u.5
for
100193482
tae-r.2
for
123164340
tae-r.2
for
123155954
tae-r.2
for
123151833
hvu-r.1
for
123407287
sbi-r.1
for
110430175
bdi-r.1
for
100845106
cre-r.1
for
CHLRE_03g158000v5


Ortholog ID: 6891
Species bra bra bna bna bna ath ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103837478 LOC103873768 LOC106347925 LOC106410774 LOC106348318 GSA2 GSA1 LOC121215506 LOC107926284 LOC102627733 GSA1 LOC100790574 LOC100250737 LOC7456623 LOC11420447 GSA-AT LOC102593524 LOC107769957 LOC107815022 LOC142177521 LOC4346136 LOC100193482 LOC123164340 LOC123155954 LOC123151833 LOC123407287 LOC110430175 LOC100845106 CHLRE_03g158000v5
Function* glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate 1-semialdehyde aminotransferase glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate 1-semialdehyde 2,1-aminomutase glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like Glutamate-1-semialdehyde 21-aminomutase 2 chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03018 RNA degradation 2
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 9
bna01240 Biosynthesis of cofactors 9
bna00970 Aminoacyl-tRNA biosynthesis 3
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 10
bna01240 Biosynthesis of cofactors 10
bna04016 MAPK signaling pathway - plant 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 11
bna01240 Biosynthesis of cofactors 11
bna00970 Aminoacyl-tRNA biosynthesis 3
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 7
ath03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 9
ath01240 Biosynthesis of cofactors 9
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 9
ghi01240 Biosynthesis of cofactors 7
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00250 Alanine, aspartate and glutamate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma01240 Biosynthesis of cofactors 7
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma01240 Biosynthesis of cofactors 6
gma03010 Ribosome 5
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi03010 Ribosome 3
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 4
ppo00270 Cysteine and methionine metabolism 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly01240 Biosynthesis of cofactors 5
sly00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00860 Porphyrin metabolism 4
sot03018 RNA degradation 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03060 Protein export 2
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00860 Porphyrin metabolism 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma03010 Ribosome 3
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 9
tae01240 Biosynthesis of cofactors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 6
sbi01240 Biosynthesis of cofactors 5
sbi03010 Ribosome 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 11
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103837478 103873768 106347925 106410774 106348318 824034 836476 121215506 107926284 102627733 547795 100790574 100250737 7456623 11420447 543967 102593524 107769957 107815022 142177521 4346136 100193482 123164340 123155954 123151833 123407287 110430175 100845106 5723033
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