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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103838609   RNA-binding protein 1 
 ath-u.5   RBP1   RNA-binding protein 1 
 gma-u.5   100816822   RNA-binding protein 1 
 gma-u.5   100786665   RNA-binding protein 1 
 vvi-u.5   100255821   uncharacterized LOC100255821 
 ppo-u.5   7472638   RNA-binding protein 1 
 mtr-u.5   25489991   heterogeneous nuclear ribonucleoprotein 1 
 sly-u.5   101254896   RNA-binding protein 1 
 osa-u.5   4342307   heterogeneous nuclear ribonucleoprotein 1 
 zma-u.5   103631917   DAZ-associated protein 1 
 zma-u.5   100192067   Ribonucleoprotein like protein 

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Top 50 coexpressed genes to 103838609 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103838609 (bra-r.6 coexpression data)

CoexMap"103838609"


braLOC103838609 | Entrez gene ID : 103838609    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03015 [list] [network] mRNA surveillance pathway (205 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009113307.1 [sequence] [blastp]
XP_009113308.1 [sequence] [blastp]
XP_033136175.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  nucl 2,  cyto_pero 2,  chlo 1,  mito 1,  cyto_nucl 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_009113307.1)
pero 4,  nucl 2,  cyto_pero 2,  chlo 1,  mito 1,  cyto_nucl 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_009113308.1)
pero 4,  nucl 2,  cyto_pero 2,  chlo 1,  mito 1,  cyto_nucl 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_033136175.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009113307.1)
other 8  (predict for XP_009113308.1)
other 8  (predict for XP_033136175.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103838609
ath-u.5
for
RBP1
gma-u.5
for
100816822
gma-u.5
for
100786665
vvi-u.5
for
100255821
ppo-u.5
for
7472638
mtr-u.5
for
25489991
sly-u.5
for
101254896
osa-u.5
for
4342307
zma-u.5
for
103631917
zma-u.5
for
100192067


Ortholog ID: 8285
Species bra bna bna ath ghi ghi gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi
Symbol LOC103838609 LOC106366596 LOC111211184 RBP1 LOC121218187 LOC107930589 LOC100816822 LOC100255821 LOC7472638 LOC25489991 LOC101254896 LOC102582431 LOC107803798 LOC107791027 LOC4342307 LOC103631917 LOC100192067 LOC123052903 LOC123188907 LOC123426305 LOC8084305 LOC8084186 LOC100846266
Function* RNA-binding protein 1 RNA-binding protein 1 RNA-binding protein 1-like RNA-binding protein 1 RNA-binding protein 1 RNA-binding protein 1 RNA-binding protein 1 uncharacterized LOC100255821 RNA-binding protein 1 heterogeneous nuclear ribonucleoprotein 1 RNA-binding protein 1 RNA-binding protein 1-like RNA-binding protein 1 RNA-binding protein 1 heterogeneous nuclear ribonucleoprotein 1 DAZ-associated protein 1 Ribonucleoprotein like protein RNA-binding protein 1 RNA-binding protein 1 heterogeneous nuclear ribonucleoprotein 1-like heterogeneous nuclear ribonucleoprotein 1 RNA-binding protein 3 heterogeneous nuclear ribonucleoprotein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 2
zma04382 Cornified envelope formation 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103838609 106366596 111211184 842216 121218187 107930589 100816822 100255821 7472638 25489991 101254896 102582431 107803798 107791027 4342307 103631917 100192067 123052903 123188907 123426305 8084305 8084186 100846266
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