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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103840234   glucose-repressible alcohol dehydrogenase transcriptional effector 
 bra-r.6   103833806   glucose-repressible alcohol dehydrogenase transcriptional effector 
 bna-r.1   106345533   carbon catabolite repressor protein 4 homolog 4 
 bna-r.1   106401249   carbon catabolite repressor protein 4 homolog 4 
 bna-r.1   106351701   carbon catabolite repressor protein 4 homolog 4-like 
 ath-u.5   AT1G31500   DNAse I-like superfamily protein 
 ghi-r.1   107933500   carbon catabolite repressor protein 4 homolog 4 
 ghi-r.1   107946845   carbon catabolite repressor protein 4 homolog 4 
 cit-r.1   102627526   carbon catabolite repressor protein 4 homolog 4 
 gma-u.5   100775932   carbon catabolite repressor protein 4 homolog 4 
 vvi-u.5   100256249   carbon catabolite repressor protein 4 homolog 4 
 ppo-u.5   7465489   carbon catabolite repressor protein 4 homolog 4 
 mtr-u.5   11416580   carbon catabolite repressor protein 4 homolog 4 
 sly-u.5   101260665   exonuclease-endonuclease-phosphatase superfamily protein 
 sot-r.1   102585458   carbon catabolite repressor protein 4 homolog 4 
 nta-r.1   107794486   carbon catabolite repressor protein 4 homolog 4 
 nta-r.1   107817633   carbon catabolite repressor protein 4 homolog 4-like 
 osa-u.5   4338672   carbon catabolite repressor protein 4 homolog 4 
 zma-u.5   100282428   uncharacterized LOC100282428 
 tae-r.2   123181872   carbon catabolite repressor protein 4 homolog 4 
 tae-r.2   123131031   carbon catabolite repressor protein 4 homolog 4 
 tae-r.2   123054295   carbon catabolite repressor protein 4 homolog 4 
 hvu-r.1   123439722   carbon catabolite repressor protein 4 homolog 4-like 
 sbi-r.1   8076845   carbon catabolite repressor protein 4 homolog 4 
 bdi-r.1   100836451   carbon catabolite repressor protein 4 homolog 4 

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Top 50 coexpressed genes to 103840234 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103840234 (bra-r.6 coexpression data)

CoexMap"103840234"


braLOC103840234 | Entrez gene ID : 103840234    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03018 [list] [network] RNA degradation (187 genes)
GO BP
GO CC
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (22 genes)  IEA  
Protein XP_033135670.1 [sequence] [blastp]
XP_033135671.1 [sequence] [blastp]
XP_033135672.1 [sequence] [blastp]
XP_033135673.1 [sequence] [blastp]
XP_033135674.1 [sequence] [blastp]
XP_033135675.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_033135670.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_033135671.1)
nucl 5,  cyto 4,  mito 1,  cysk 1  (predict for XP_033135672.1)
nucl 5,  cyto 4,  mito 1,  cysk 1  (predict for XP_033135673.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_033135674.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_033135675.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_033135670.1)
chlo 5,  mito 3  (predict for XP_033135671.1)
other 9  (predict for XP_033135672.1)
other 9  (predict for XP_033135673.1)
mito 5  (predict for XP_033135674.1)
mito 5  (predict for XP_033135675.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103840234
bra-r.6
for
103833806
bna-r.1
for
106345533
bna-r.1
for
106401249
bna-r.1
for
106351701
ath-u.5
for
AT1G31500
ghi-r.1
for
107933500
ghi-r.1
for
107946845
cit-r.1
for
102627526
gma-u.5
for
100775932
vvi-u.5
for
100256249
ppo-u.5
for
7465489
mtr-u.5
for
11416580
sly-u.5
for
101260665
sot-r.1
for
102585458
nta-r.1
for
107794486
nta-r.1
for
107817633
osa-u.5
for
4338672
zma-u.5
for
100282428
tae-r.2
for
123181872
tae-r.2
for
123131031
tae-r.2
for
123054295
hvu-r.1
for
123439722
sbi-r.1
for
8076845
bdi-r.1
for
100836451


Ortholog ID: 9823
Species bra bra bna bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103840234 LOC103833806 LOC106345533 LOC106351701 LOC106364593 AT1G31500 LOC107933500 LOC107946845 LOC102627526 LOC100775932 LOC100256249 LOC7465489 LOC11416580 LOC101260665 LOC102585458 LOC107794486 LOC107817633 LOC4338672 LOC100282428 LOC123181872 LOC123131031 LOC123054295 LOC123439722 LOC8076845 LOC100836451
Function* glucose-repressible alcohol dehydrogenase transcriptional effector glucose-repressible alcohol dehydrogenase transcriptional effector carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like carbon catabolite repressor protein 4 homolog 4-like DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 exonuclease-endonuclease-phosphatase superfamily protein carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like carbon catabolite repressor protein 4 homolog 4 uncharacterized LOC100282428 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4-like carbon catabolite repressor protein 4 homolog 4 carbon catabolite repressor protein 4 homolog 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 3
nta03010 Ribosome 3
nta03018 RNA degradation 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01210 2-Oxocarboxylic acid metabolism 6
osa00785 Lipoic acid metabolism 6
osa01200 Carbon metabolism 6
osa00010 Glycolysis / Gluconeogenesis 5
osa00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 3
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae01240 Biosynthesis of cofactors 6
tae00230 Purine metabolism 5
tae01232 Nucleotide metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae00670 One carbon pool by folate 5
tae03018 RNA degradation 3
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103840234 103833806 106345533 106351701 106364593 840040 107933500 107946845 102627526 100775932 100256249 7465489 11416580 101260665 102585458 107794486 107817633 4338672 100282428 123181872 123131031 123054295 123439722 8076845 100836451
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