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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103845866   rRNA biogenesis protein RRP5 
 bra-r.6   103870291   rRNA biogenesis protein RRP5 
 bna-r.1   106415492   rRNA biogenesis protein RRP5 
 bna-r.1   106452513   rRNA biogenesis protein RRP5 
 bna-r.1   106351390   rRNA biogenesis protein RRP5 
 ath-u.5   AT3G11964   RIBOSOMAL RNA PROCESSING 5 
 ghi-r.1   107903653   rRNA biogenesis protein RRP5 
 ghi-r.1   107891228   rRNA biogenesis protein RRP5 
 ghi-r.1   107889476   rRNA biogenesis protein RRP5 
 cit-r.1   102625636   rRNA biogenesis protein RRP5 
 gma-u.5   100797745   rRNA biogenesis protein RRP5 
 gma-u.5   100793149   rRNA biogenesis protein RRP5 
 vvi-u.5   100262322   rRNA biogenesis protein RRP5 
 ppo-u.5   7488047   rRNA biogenesis protein RRP5 
 mtr-u.5   25483593   rRNA biogenesis protein RRP5 
 sly-u.5   101261692   rRNA biogenesis protein RRP5 
 sot-r.1   102584281   rRNA biogenesis protein rrp5 
 nta-r.1   107768241   rRNA biogenesis protein RRP5 
 nta-r.1   107783659   rRNA biogenesis protein RRP5 
 osa-u.5   4342673   rRNA biogenesis protein RRP5 
 zma-u.5   103632100   rRNA biogenesis protein RRP5 
 zma-u.5   103632096   rRNA biogenesis protein RRP5 
 tae-r.2   123189286   rRNA biogenesis protein RRP5 
 tae-r.2   123180238   rRNA biogenesis protein RRP5 
 hvu-r.1   123410099   rRNA biogenesis protein RRP5 
 sbi-r.1   8063685   rRNA biogenesis protein RRP5 
 bdi-r.1   100825699   rRNA biogenesis protein RRP5 
 cre-r.1   CHLRE_10g428750v5   uncharacterized protein 

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Top 50 coexpressed genes to 103845866 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103845866 (bra-r.6 coexpression data)

CoexMap"103845866"


braLOC103845866 | Entrez gene ID : 103845866    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 2 1 1 1 1 1 2 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (309 genes)  IEA  
GO CC
GO:0032040 [list] [network] small-subunit processome  (75 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (300 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033137964.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  chlo_mito 3,  mito 1  (predict for XP_033137964.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_033137964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103845866
bra-r.6
for
103870291
bna-r.1
for
106415492
bna-r.1
for
106452513
bna-r.1
for
106351390
ath-u.5
for
AT3G11964
ghi-r.1
for
107903653
ghi-r.1
for
107891228
ghi-r.1
for
107889476
cit-r.1
for
102625636
gma-u.5
for
100797745
gma-u.5
for
100793149
vvi-u.5
for
100262322
ppo-u.5
for
7488047
mtr-u.5
for
25483593
sly-u.5
for
101261692
sot-r.1
for
102584281
nta-r.1
for
107768241
nta-r.1
for
107783659
osa-u.5
for
4342673
zma-u.5
for
103632100
zma-u.5
for
103632096
tae-r.2
for
123189286
tae-r.2
for
123180238
hvu-r.1
for
123410099
sbi-r.1
for
8063685
bdi-r.1
for
100825699
cre-r.1
for
CHLRE_10g428750v5


Ortholog ID: 6870
Species bra bra bna bna bna ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC103845866 LOC103870291 LOC106452513 LOC106351390 LOC106450308 AT3G11964 LOC107903653 LOC107891228 LOC107889476 LOC102625636 LOC100797745 LOC100793149 LOC100262322 LOC7488047 LOC25483593 LOC101261692 LOC102584281 LOC107768241 LOC107783659 LOC4342673 LOC103632100 LOC103632096 LOC123189286 LOC123108255 LOC123410099 LOC8063685 LOC100825699 CHLRE_10g428750v5
Function* rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5-like RIBOSOMAL RNA PROCESSING 5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein rrp5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 rRNA biogenesis protein RRP5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03020 RNA polymerase 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103845866 103870291 106452513 106351390 106450308 820370 107903653 107891228 107889476 102625636 100797745 100793149 100262322 7488047 25483593 101261692 102584281 107768241 107783659 4342673 103632100 103632096 123189286 123108255 123410099 8063685 100825699 5728131
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