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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103846540   agamous-like MADS-box protein AGL15 
 ath-u.5   AGL18   AGAMOUS-like 18 
 ath-u.5   AGL15   AGAMOUS-like 15 
 gma-u.5   AGL15   AGL15 protein 
 gma-u.5   100792278   agamous-like MADS-box protein AGL18 
 gma-u.5   100776732   agamous-like MADS-box protein AGL15 
 vvi-u.5   100253397   agamous-like MADS-box protein AGL15 
 sly-u.5   101260573   agamous-like MADS-box protein AGL15 

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Top 50 coexpressed genes to 103846540 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103846540 (bra-r.6 coexpression data)

CoexMap"103846540"


braLOC103846540 | Entrez gene ID : 103846540    
Species bra ath gma vvi sly hvu zma bna cit ghi osa mtr ppo sbi bdi nta tae cre sot
Paralog 1 2 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (248 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (391 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (478 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
Protein XP_009121726.1 [sequence] [blastp]
XP_009121728.1 [sequence] [blastp]
XP_033137361.1 [sequence] [blastp]
XP_033137362.1 [sequence] [blastp]
XP_033137363.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_009121726.1)
nucl 10  (predict for XP_009121728.1)
nucl 10  (predict for XP_033137361.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_033137362.1)
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_033137363.1)
Subcellular
localization
TargetP
other 7  (predict for XP_009121726.1)
other 7  (predict for XP_009121728.1)
other 7  (predict for XP_033137361.1)
mito 5,  chlo 5  (predict for XP_033137362.1)
mito 6,  chlo 5  (predict for XP_033137363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103846540
ath-u.5
for
AGL18
ath-u.5
for
AGL15
gma-u.5
for
AGL15
gma-u.5
for
100792278
gma-u.5
for
100776732
vvi-u.5
for
100253397
sly-u.5
for
101260573


Ortholog ID: 3592
Species bra bna bna ath ath cit gma gma vvi sly
Symbol LOC103863049 LOC125579041 LOC125593423 AGL18 AGL15 LOC102612882 LOC100776732 AGL15 LOC100253397 LOC101260573
Function* agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 AGAMOUS-like 18 AGAMOUS-like 15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 AGL15 protein agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103863049 125579041 125593423 824906 831224 102612882 100776732 547732 100253397 101260573
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