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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  AGL15  AGL15 protein 
 gma-r.7  AGL15  AGL15 protein 
 gma-u.5  100792278  agamous-like MADS-box protein AGL18 
 gma-u.5  100776732  agamous-like MADS-box protein AGL15 
 ath-u.5  AGL18  AGAMOUS-like 18 
 ath-u.5  AGL15  AGAMOUS-like 15 
 vvi-u.5  100253397  agamous-like MADS-box protein AGL15 
 sly-u.5  101260573  agamous-like MADS-box protein AGL15 

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Top 50 coexpressed genes to AGL15 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL15 (gma-u.5 coexpression data)

CoexMap"547732"


gmaAGL15 | Entrez gene ID : 547732
Species gma ath vvi sly sbi nta mtr osa cre cit bra ppo hvu bdi sot zma tae bna ghi
Paralog 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (294 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
Protein NP_001237033.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001237033.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001237033.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
AGL15

.

gma-r.7
for
AGL15

.

gma-u.5
for
100792278

.

gma-u.5
for
100776732

.

ath-u.5
for
AGL18

.

ath-u.5
for
AGL15

.

vvi-u.5
for
100253397

.

sly-u.5
for
101260573

.


Ortholog ID: 3592
Species ath ath gma gma sly bra vvi bna bna cit
Symbol AGL18 AGL15 LOC100776732 AGL15 LOC101260573 LOC103863049 LOC100253397 LOC125579041 LOC125593423 LOC102612882
Function* AGAMOUS-like 18 AGAMOUS-like 15 agamous-like MADS-box protein AGL15 AGL15 protein agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824906 831224 100776732 547732 101260573 103863049 100253397 125579041 125593423 102612882
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