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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856031   agamous-like MADS-box protein AGL15 
 bra-r.6   103863049   agamous-like MADS-box protein AGL18 
 bra-r.6   103841644   agamous-like MADS-box protein AGL18 
 bna-r.1   125593423   agamous-like MADS-box protein AGL15 
 bna-r.1   125579041   agamous-like MADS-box protein AGL15 
 ath-u.5   AGL18   AGAMOUS-like 18 
 ath-u.5   AGL15   AGAMOUS-like 15 
 cit-r.1   102612882   agamous-like MADS-box protein AGL15 
 gma-u.5   AGL15   AGL15 protein 
 gma-u.5   100792278   agamous-like MADS-box protein AGL18 
 gma-u.5   100776732   agamous-like MADS-box protein AGL15 
 vvi-u.5   100253397   agamous-like MADS-box protein AGL15 
 sly-u.5   101260573   agamous-like MADS-box protein AGL15 

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Top 50 coexpressed genes to 103856031 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856031 (bra-r.6 coexpression data)

CoexMap"103856031"


braLOC103856031 | Entrez gene ID : 103856031    
Species bra bna ath cit gma vvi sly osa nta bdi sot ppo tae zma mtr hvu sbi cre ghi
Paralog 3 2 2 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (248 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (391 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (478 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
Protein XP_009131359.1 [sequence] [blastp]
XP_009131360.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_009131359.1)
nucl 10  (predict for XP_009131360.1)
Subcellular
localization
TargetP
other 6  (predict for XP_009131359.1)
other 7,  mito 3  (predict for XP_009131360.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856031
bra-r.6
for
103863049
bra-r.6
for
103841644
bna-r.1
for
125593423
bna-r.1
for
125579041
ath-u.5
for
AGL18
ath-u.5
for
AGL15
cit-r.1
for
102612882
gma-u.5
for
AGL15
gma-u.5
for
100792278
gma-u.5
for
100776732
vvi-u.5
for
100253397
sly-u.5
for
101260573


Ortholog ID: 3592
Species bra bra bna bna ath ath cit gma gma gma vvi sly
Symbol LOC103863049 LOC103841644 LOC125593423 LOC125579041 AGL18 AGL15 LOC102612882 AGL15 LOC100792278 LOC100776732 LOC100253397 LOC101260573
Function* agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 AGAMOUS-like 18 AGAMOUS-like 15 agamous-like MADS-box protein AGL15 AGL15 protein agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103863049 103841644 125593423 125579041 824906 831224 102612882 547732 100792278 100776732 100253397 101260573
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