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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103848890   putative pentatricopeptide repeat-containing protein At1g13630 
 bna-r.1   106346556   putative pentatricopeptide repeat-containing protein At1g13630 
 bna-r.1   106431580   putative pentatricopeptide repeat-containing protein At1g13630 
 ath-u.5   AT1G13630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107936434   putative pentatricopeptide repeat-containing protein At1g13630 
 ghi-r.1   107887389   putative pentatricopeptide repeat-containing protein At1g13630 
 cit-r.1   102628067   putative pentatricopeptide repeat-containing protein At1g13630 
 vvi-u.5   100256494   putative pentatricopeptide repeat-containing protein At1g13630 
 ppo-u.5   7482239   putative pentatricopeptide repeat-containing protein At1g13630 
 sly-u.5   101258153   putative pentatricopeptide repeat-containing protein At1g13630 
 sot-r.1   102580185   putative pentatricopeptide repeat-containing protein At1g13630 
 nta-r.1   107806853   uncharacterized LOC107806853 
 nta-r.1   107802371   uncharacterized LOC107802371 
 osa-u.5   4348913   putative pentatricopeptide repeat-containing protein At1g13630 
 tae-r.2   123181085   putative pentatricopeptide repeat-containing protein At1g13630 
 tae-r.2   123121430   putative pentatricopeptide repeat-containing protein At1g13630 
 tae-r.2   123045831   putative pentatricopeptide repeat-containing protein At1g13630 
 hvu-r.1   123431222   putative pentatricopeptide repeat-containing protein At1g13630 
 sbi-r.1   8067411   putative pentatricopeptide repeat-containing protein At1g13630 
 bdi-r.1   100842666   putative pentatricopeptide repeat-containing protein At1g13630 

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Top 50 coexpressed genes to 103848890 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103848890 (bra-r.6 coexpression data)

CoexMap"103848890"


braLOC103848890 | Entrez gene ID : 103848890    
Species bra bna ath ghi cit vvi ppo sly sot nta osa tae hvu sbi bdi gma zma cre mtr
Paralog 1 2 1 2 1 1 1 1 1 2 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009123962.1 [sequence] [blastp]
XP_009123963.1 [sequence] [blastp]
XP_033129051.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_009123962.1)
chlo 6,  chlo_mito 5,  mito 2,  cyto_mito 1  (predict for XP_009123963.1)
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_033129051.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for XP_009123962.1)
chlo 5,  mito 5  (predict for XP_009123963.1)
chlo 5,  mito 5  (predict for XP_033129051.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103848890
bna-r.1
for
106346556
bna-r.1
for
106431580
ath-u.5
for
AT1G13630
ghi-r.1
for
107936434
ghi-r.1
for
107887389
cit-r.1
for
102628067
vvi-u.5
for
100256494
ppo-u.5
for
7482239
sly-u.5
for
101258153
sot-r.1
for
102580185
nta-r.1
for
107806853
nta-r.1
for
107802371
osa-u.5
for
4348913
tae-r.2
for
123181085
tae-r.2
for
123121430
tae-r.2
for
123045831
hvu-r.1
for
123431222
sbi-r.1
for
8067411
bdi-r.1
for
100842666


Ortholog ID: 12245
Species bra bna bna ath ghi ghi cit vvi ppo sly sot nta nta osa tae tae tae hvu sbi bdi
Symbol LOC103848890 LOC106346556 LOC106431580 AT1G13630 LOC107936434 LOC107887389 LOC102628067 LOC100256494 LOC7482239 LOC101258153 LOC102580185 LOC107806853 LOC107802371 LOC4348913 LOC123181085 LOC123121430 LOC123045831 LOC123431222 LOC8067411 LOC100842666
Function* putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 uncharacterized LOC107806853 uncharacterized LOC107802371 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630 putative pentatricopeptide repeat-containing protein At1g13630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103848890 106346556 106431580 837924 107936434 107887389 102628067 100256494 7482239 101258153 102580185 107806853 107802371 4348913 123181085 123121430 123045831 123431222 8067411 100842666
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