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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103851003   U3 small nucleolar ribonucleoprotein protein IMP3 
 bra-r.6   103856160   U3 small nucleolar ribonucleoprotein protein IMP3 
 bna-r.1   106443125   U3 small nucleolar ribonucleoprotein protein IMP3 
 bna-r.1   106432413   U3 small nucleolar ribonucleoprotein protein IMP3-like 
 bna-r.1   106367165   U3 small nucleolar ribonucleoprotein protein IMP3 
 ath-u.5   AT5G15750   Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 
 ghi-r.1   107907508   U3 small nucleolar ribonucleoprotein protein IMP3 
 ghi-r.1   107907364   U3 small nucleolar ribonucleoprotein protein IMP3 
 cit-r.1   102618155   uncharacterized LOC102618155 
 gma-u.5   100798516   U3 small nucleolar ribonucleoprotein protein IMP3 
 gma-u.5   100782389   U3 small nucleolar ribonucleoprotein protein IMP3 
 vvi-u.5   100261745   uncharacterized LOC100261745 
 ppo-u.5   18107360   uncharacterized LOC18107360 
 ppo-u.5   18097673   uncharacterized LOC18097673 
 mtr-u.5   11409612   U3 small nucleolar ribonucleoprotein protein IMP3 
 sly-u.5   101249976   alpha-L RNA-binding motif/ribosomal protein S4 family protein 
 sot-r.1   102598876   U3 small nucleolar ribonucleoprotein protein IMP3 
 nta-r.1   107765174   uncharacterized LOC107765174 
 nta-r.1   107772482   uncharacterized LOC107772482 
 osa-u.5   4337293   uncharacterized LOC4337293 
 zma-u.5   100193155   U3 small nucleolar ribonucleoprotein protein IMP3-like 
 tae-r.2   123190652   U3 small nucleolar ribonucleoprotein protein IMP3 
 tae-r.2   123046978   U3 small nucleolar ribonucleoprotein protein IMP3 
 tae-r.2   123054809   U3 small nucleolar ribonucleoprotein protein IMP3 
 hvu-r.1   123428034   U3 small nucleolar ribonucleoprotein protein IMP3 
 sbi-r.1   8061490   U3 small nucleolar ribonucleoprotein protein IMP3 
 sbi-r.1   8070276   U3 small nucleolar ribonucleoprotein protein IMP3 
 bdi-r.1   100826196   U3 small nucleolar ribonucleoprotein protein IMP3 
 cre-r.1   CHLRE_03g170750v5   uncharacterized protein 

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Top 50 coexpressed genes to 103851003 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103851003 (bra-r.6 coexpression data)

CoexMap"103851003"


braLOC103851003 | Entrez gene ID : 103851003    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 2 1 2 1 1 1 2 1 1 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03008 [list] [network] Ribosome biogenesis in eukaryotes (1509 genes)
GO BP
GO:0006364 [list] [network] rRNA processing  (309 genes)  IEA  
GO CC
GO:0034457 [list] [network] Mpp10 complex  (5 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (75 genes)  IEA  
GO:0015935 [list] [network] small ribosomal subunit  (208 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (37 genes)  IEA  
GO:0019843 [list] [network] rRNA binding  (120 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
Protein XP_009126067.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  mito 1,  plas 1,  extr 1,  E.R. 1,  pero 1,  cysk 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_009126067.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_009126067.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103851003
bra-r.6
for
103856160
bna-r.1
for
106443125
bna-r.1
for
106432413
bna-r.1
for
106367165
ath-u.5
for
AT5G15750
ghi-r.1
for
107907508
ghi-r.1
for
107907364
cit-r.1
for
102618155
gma-u.5
for
100798516
gma-u.5
for
100782389
vvi-u.5
for
100261745
ppo-u.5
for
18107360
ppo-u.5
for
18097673
mtr-u.5
for
11409612
sly-u.5
for
101249976
sot-r.1
for
102598876
nta-r.1
for
107765174
nta-r.1
for
107772482
osa-u.5
for
4337293
zma-u.5
for
100193155
tae-r.2
for
123190652
tae-r.2
for
123046978
tae-r.2
for
123054809
hvu-r.1
for
123428034
sbi-r.1
for
8061490
sbi-r.1
for
8070276
bdi-r.1
for
100826196
cre-r.1
for
CHLRE_03g170750v5


Ortholog ID: 7334
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC103851003 LOC103856160 LOC106443125 LOC106432413 LOC106364995 AT5G15750 LOC107907508 LOC107907364 LOC102618155 LOC100798516 LOC100782389 LOC100261745 LOC18107360 LOC18097673 LOC11409612 LOC101249976 LOC102598876 LOC107765174 LOC107772482 LOC4337293 LOC100193155 LOC123190652 LOC123046978 LOC123054809 LOC123428034 LOC8061490 LOC8070276 LOC100826196 CHLRE_03g170750v5
Function* U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3-like U3 small nucleolar ribonucleoprotein protein IMP3 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 uncharacterized LOC102618155 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 uncharacterized LOC100261745 uncharacterized LOC18107360 uncharacterized LOC18097673 U3 small nucleolar ribonucleoprotein protein IMP3 alpha-L RNA-binding motif/ribosomal protein S4 family protein U3 small nucleolar ribonucleoprotein protein IMP3 uncharacterized LOC107765174 uncharacterized LOC107772482 uncharacterized LOC4337293 U3 small nucleolar ribonucleoprotein protein IMP3-like U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 U3 small nucleolar ribonucleoprotein protein IMP3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 3
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03018 RNA degradation 2
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
cre03020 RNA polymerase 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103851003 103856160 106443125 106432413 106364995 831431 107907508 107907364 102618155 100798516 100782389 100261745 18107360 18097673 11409612 101249976 102598876 107765174 107772482 4337293 100193155 123190652 123046978 123054809 123428034 8061490 8070276 100826196 5728940
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