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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103852774   RING-H2 finger protein ATL3 
 bra-r.6   103848508   RING-H2 finger protein ATL60 
 bra-r.6   103831742   RING-H2 finger protein ATL3 
 bna-r.1   106354208   RING-H2 finger protein ATL3 
 ath-u.5   ATL3   RING/U-box superfamily protein 
 ghi-r.1   107913832   RING-H2 finger protein ATL3 
 ghi-r.1   107958341   RING-H2 finger protein ATL3 
 ghi-r.1   107906030   RING-H2 finger protein ATL3 
 cit-r.1   102617802   RING-H2 finger protein ATL60 
 gma-u.5   100777158   RING-H2 finger protein ATL3 
 gma-u.5   100797420   RING-H2 finger protein ATL3 
 gma-u.5   100775523   RING-H2 finger protein ATL3 
 vvi-u.5   100267019   RING-H2 finger protein ATL3 
 ppo-u.5   7461958   RING-H2 finger protein ATL3 
 ppo-u.5   18094663   RING-H2 finger protein ATL3 
 mtr-u.5   11441359   RING-H2 finger protein ATL60 
 mtr-u.5   25499753   RING-H2 finger protein ATL3 
 sly-u.5   101254104   RING-H2 finger protein ATL3 
 sly-u.5   101251958   RING-H2 finger protein ATL3-like 
 sly-u.5   101244650   RING-H2 finger protein ATL3-like 
 sot-r.1   102594289   RING-H2 finger protein ATL3-like 
 sot-r.1   102585558   RING-H2 finger protein ATL60-like 
 nta-r.1   107762512   RING-H2 finger protein ATL60-like 
 nta-r.1   107821158   RING-H2 finger protein ATL60-like 
 nta-r.1   107807068   RING-H2 finger protein ATL60-like 
 osa-u.5   4340377   RING-H2 finger protein ATL3 
 zma-u.5   107521953   Zinc finger nuclease2 
 zma-u.5   103629867   RING-H2 finger protein ATL3 
 tae-r.2   123148432   RING-H2 finger protein ATL3-like 
 tae-r.2   123157042   RING-H2 finger protein ATL3 
 tae-r.2   123168519   RING-H2 finger protein ATL3 
 hvu-r.1   123410299   RING-H2 finger protein ATL3-like 
 sbi-r.1   8077293   E3 ubiquitin-protein ligase EL5 
 bdi-r.1   100842318   RING-H2 finger protein ATL3 

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Top 50 coexpressed genes to 103852774 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103852774 (bra-r.6 coexpression data)

CoexMap"103852774"


braLOC103852774 | Entrez gene ID : 103852774    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 3 1 3 1 2 2 3 2 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO MF
Protein XP_009127926.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_009127926.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009127926.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103852774
bra-r.6
for
103848508
bra-r.6
for
103831742
bna-r.1
for
106354208
ath-u.5
for
ATL3
ghi-r.1
for
107913832
ghi-r.1
for
107958341
ghi-r.1
for
107906030
cit-r.1
for
102617802
gma-u.5
for
100777158
gma-u.5
for
100797420
gma-u.5
for
100775523
vvi-u.5
for
100267019
ppo-u.5
for
7461958
ppo-u.5
for
18094663
mtr-u.5
for
11441359
mtr-u.5
for
25499753
sly-u.5
for
101254104
sly-u.5
for
101251958
sly-u.5
for
101244650
sot-r.1
for
102594289
sot-r.1
for
102585558
nta-r.1
for
107762512
nta-r.1
for
107821158
nta-r.1
for
107807068
osa-u.5
for
4340377
zma-u.5
for
107521953
zma-u.5
for
103629867
tae-r.2
for
123148432
tae-r.2
for
123157042
tae-r.2
for
123168519
hvu-r.1
for
123410299
sbi-r.1
for
8077293
bdi-r.1
for
100842318


Ortholog ID: 3751
Species bra bra bra bna bna ath ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103852774 LOC103848508 LOC103831742 LOC106354208 LOC106433039 ATL3 LOC107913832 LOC107958341 LOC102617802 LOC100777158 LOC100797420 LOC100775523 LOC100267019 LOC7461958 LOC18094663 LOC11441359 LOC25499753 LOC101254104 LOC101251958 LOC101244650 LOC102585558 LOC107062603 LOC107762512 LOC107807068 LOC107775246 LOC4340377 LOC107521953 LOC103629867 LOC123148432 LOC123157042 LOC123168519 LOC123410299 LOC8077293 LOC100842318
Function* RING-H2 finger protein ATL3 RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING/U-box superfamily protein RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL60 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3-like RING-H2 finger protein ATL3-like RING-H2 finger protein ATL60-like RING-H2 finger protein ATL3-like RING-H2 finger protein ATL60-like RING-H2 finger protein ATL60-like RING-H2 finger protein ATL60-like RING-H2 finger protein ATL3 Zinc finger nuclease2 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3-like RING-H2 finger protein ATL3 RING-H2 finger protein ATL3 RING-H2 finger protein ATL3-like E3 ubiquitin-protein ligase EL5 RING-H2 finger protein ATL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna04626 Plant-pathogen interaction 3
bna00940 Phenylpropanoid biosynthesis 2
bna00230 Purine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 6
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04130 SNARE interactions in vesicular transport 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04712 Circadian rhythm - plant 2
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 5
bdi04016 MAPK signaling pathway - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103852774 103848508 103831742 106354208 106433039 843563 107913832 107958341 102617802 100777158 100797420 100775523 100267019 7461958 18094663 11441359 25499753 101254104 101251958 101244650 102585558 107062603 107762512 107807068 107775246 4340377 107521953 103629867 123148432 123157042 123168519 123410299 8077293 100842318
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