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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103854764   LL-diaminopimelate aminotransferase, chloroplastic 
 bra-r.6   103861095   aminotransferase ALD1, chloroplastic 
 bra-r.6   103834462   LL-diaminopimelate aminotransferase, chloroplastic 
 bna-r.1   106405750   LL-diaminopimelate aminotransferase, chloroplastic 
 bna-r.1   111204598   aminotransferase ALD1, chloroplastic 
 bna-r.1   106370770   LL-diaminopimelate aminotransferase, chloroplastic 
 ath-u.5   ALD1   AGD2-like defense response protein 1 
 ath-u.5   AGD2   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 ghi-r.1   107938864   LL-diaminopimelate aminotransferase, chloroplastic 
 ghi-r.1   107908578   LL-diaminopimelate aminotransferase, chloroplastic 
 cit-r.1   102623766   LL-diaminopimelate aminotransferase, chloroplastic 
 cit-r.1   102619865   aminotransferase ALD1, chloroplastic 
 gma-u.5   100791895   aminotransferase ALD1, chloroplastic 
 gma-u.5   100801405   LL-diaminopimelate aminotransferase, chloroplastic 
 gma-u.5   100807796   LL-diaminopimelate aminotransferase, chloroplastic 
 vvi-u.5   100267796   aminotransferase ALD1, chloroplastic 
 vvi-u.5   100244650   LL-diaminopimelate aminotransferase, chloroplastic 
 ppo-u.5   18099211   probable LL-diaminopimelate aminotransferase, chloroplastic 
 ppo-u.5   7469666   LL-diaminopimelate aminotransferase, chloroplastic 
 mtr-u.5   11434331   aminotransferase ALD1, chloroplastic 
 mtr-u.5   11416415   LL-diaminopimelate aminotransferase, chloroplastic 
 sly-u.5   101252192   LL-diaminopimelate aminotransferase, chloroplastic 
 sly-u.5   101252842   aminotransferase ALD1, chloroplastic 
 sot-r.1   102597847   LL-diaminopimelate aminotransferase, chloroplastic 
 sot-r.1   102580299   aminotransferase ALD1 
 nta-r.1   107763425   LL-diaminopimelate aminotransferase, chloroplastic 
 nta-r.1   107811239   LL-diaminopimelate aminotransferase, chloroplastic 
 nta-r.1   107784853   aminotransferase ALD1, chloroplastic-like 
 osa-u.5   4332563   probable LL-diaminopimelate aminotransferase, chloroplastic 
 osa-u.5   4331930   aminotransferase ALD1 homolog 
 zma-u.5   103632470   aminotransferase ALD1 homolog 
 zma-u.5   100283445   transaminase/ transferase, transferring nitrogenous groups 
 tae-r.2   123167155   probable LL-diaminopimelate aminotransferase, chloroplastic 
 tae-r.2   123160557   probable LL-diaminopimelate aminotransferase, chloroplastic 
 tae-r.2   123154437   probable LL-diaminopimelate aminotransferase, chloroplastic 
 hvu-r.1   123449441   aminotransferase ALD1 homolog 
 hvu-r.1   123448864   probable LL-diaminopimelate aminotransferase, chloroplastic 
 sbi-r.1   8084016   probable LL-diaminopimelate aminotransferase, chloroplastic 
 sbi-r.1   8081893   aminotransferase ALD1 homolog 
 bdi-r.1   100827448   probable LL-diaminopimelate aminotransferase, chloroplastic 
 bdi-r.1   100831819   probable LL-diaminopimelate aminotransferase, chloroplastic 
 bdi-r.1   100834072   probable LL-diaminopimelate aminotransferase, chloroplastic 
 cre-r.1   CHLRE_17g734200v5   uncharacterized protein 

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Top 50 coexpressed genes to 103854764 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103854764 (bra-r.6 coexpression data)

CoexMap"103854764"


braLOC103854764 | Entrez gene ID : 103854764    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 2 2 3 2 2 2 2 2 3 2 2 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00300 [list] [network] Lysine biosynthesis (21 genes)
brp01230 [list] [network] Biosynthesis of amino acids (370 genes)
GO BP
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (15 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (845 genes)  IEA  
GO MF
GO:0010285 [list] [network] L,L-diaminopimelate aminotransferase activity  (2 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (147 genes)  IEA  
Protein XP_018510133.2 [sequence] [blastp]
XP_018510135.2 [sequence] [blastp]
XP_018510136.2 [sequence] [blastp]
XP_033136777.1 [sequence] [blastp]
XP_033136782.1 [sequence] [blastp]
XP_033136789.1 [sequence] [blastp]
XP_033136794.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_018510133.2)
cyto 5,  chlo 2,  nucl 1,  mito 1  (predict for XP_018510135.2)
cyto 5,  chlo 2,  nucl 1,  mito 1  (predict for XP_018510136.2)
cyto 5,  chlo 2,  nucl 1,  mito 1  (predict for XP_033136777.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_033136782.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_033136789.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_033136794.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_018510133.2)
other 6  (predict for XP_018510135.2)
other 6  (predict for XP_018510136.2)
other 6  (predict for XP_033136777.1)
mito 6  (predict for XP_033136782.1)
mito 6  (predict for XP_033136789.1)
mito 6  (predict for XP_033136794.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103854764
bra-r.6
for
103861095
bra-r.6
for
103834462
bna-r.1
for
106405750
bna-r.1
for
111204598
bna-r.1
for
106370770
ath-u.5
for
ALD1
ath-u.5
for
AGD2
ghi-r.1
for
107938864
ghi-r.1
for
107908578
cit-r.1
for
102623766
cit-r.1
for
102619865
gma-u.5
for
100791895
gma-u.5
for
100801405
gma-u.5
for
100807796
vvi-u.5
for
100267796
vvi-u.5
for
100244650
ppo-u.5
for
18099211
ppo-u.5
for
7469666
mtr-u.5
for
11434331
mtr-u.5
for
11416415
sly-u.5
for
101252192
sly-u.5
for
101252842
sot-r.1
for
102597847
sot-r.1
for
102580299
nta-r.1
for
107763425
nta-r.1
for
107811239
nta-r.1
for
107784853
osa-u.5
for
4332563
osa-u.5
for
4331930
zma-u.5
for
103632470
zma-u.5
for
100283445
tae-r.2
for
123167155
tae-r.2
for
123160557
tae-r.2
for
123154437
hvu-r.1
for
123449441
hvu-r.1
for
123448864
sbi-r.1
for
8084016
sbi-r.1
for
8081893
bdi-r.1
for
100827448
bdi-r.1
for
100831819
bdi-r.1
for
100834072
cre-r.1
for
CHLRE_17g734200v5


Ortholog ID: 2374
Species bra bra bra bna bna bna ath ath ghi cit cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC103854764 LOC103861095 LOC103834462 LOC106439752 LOC106365194 LOC106361092 ALD1 AGD2 LOC107938864 LOC102623766 LOC102619865 LOC100791895 LOC100801405 LOC100807796 LOC100267796 LOC18099211 LOC7469666 LOC11434331 LOC11416415 LOC101252192 LOC101252842 LOC102597847 LOC102580299 LOC107811239 LOC107784853 LOC107781072 LOC4332563 LOC4331930 LOC103632470 LOC100283445 LOC123154437 LOC123085627 LOC123098411 LOC123449441 LOC123448864 LOC8084016 LOC8081893 LOC100827448 LOC100834072 CHLRE_17g734200v5
Function* LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic AGD2-like defense response protein 1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein LL-diaminopimelate aminotransferase, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic aminotransferase ALD1, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic probable LL-diaminopimelate aminotransferase, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1 LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1, chloroplastic-like aminotransferase ALD1, chloroplastic-like probable LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1 homolog aminotransferase ALD1 homolog transaminase/ transferase, transferring nitrogenous groups probable LL-diaminopimelate aminotransferase, chloroplastic probable LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1 homolog aminotransferase ALD1 homolog probable LL-diaminopimelate aminotransferase, chloroplastic probable LL-diaminopimelate aminotransferase, chloroplastic aminotransferase ALD1 homolog probable LL-diaminopimelate aminotransferase, chloroplastic probable LL-diaminopimelate aminotransferase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
bra00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 5
bra01210 2-Oxocarboxylic acid metabolism 3
bra00220 Arginine biosynthesis 2
bra00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00430 Taurine and hypotaurine metabolism 6
bna00300 Lysine biosynthesis 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 11
bna00300 Lysine biosynthesis 7
bna00220 Arginine biosynthesis 4
bna00740 Riboflavin metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 11
bna00300 Lysine biosynthesis 7
bna00220 Arginine biosynthesis 4
bna00740 Riboflavin metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 11
ath01210 2-Oxocarboxylic acid metabolism 5
ath00220 Arginine biosynthesis 4
ath00300 Lysine biosynthesis 4
ath01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi01230 Biosynthesis of amino acids 5
ghi00230 Purine metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 3
cit03008 Ribosome biogenesis in eukaryotes 3
cit01232 Nucleotide metabolism 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma00300 Lysine biosynthesis 5
gma00220 Arginine biosynthesis 3
gma00261 Monobactam biosynthesis 3
gma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma01200 Carbon metabolism 7
gma01240 Biosynthesis of cofactors 4
gma00220 Arginine biosynthesis 4
gma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00566 Sulfoquinovose metabolism 2
ppo00620 Pyruvate metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr00061 Fatty acid biosynthesis 3
mtr01212 Fatty acid metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 6
sly01210 2-Oxocarboxylic acid metabolism 5
sly01240 Biosynthesis of cofactors 3
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 6
sot00300 Lysine biosynthesis 4
sot01240 Biosynthesis of cofactors 4
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta03082 ATP-dependent chromatin remodeling 3
nta04146 Peroxisome 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 4
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa00300 Lysine biosynthesis 5
osa00261 Monobactam biosynthesis 2
osa00470 D-Amino acid metabolism 2
osa00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma03010 Ribosome 4
zma01230 Biosynthesis of amino acids 3
zma00300 Lysine biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00300 Lysine biosynthesis 8
tae00230 Purine metabolism 4
tae01240 Biosynthesis of cofactors 3
tae00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae00300 Lysine biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00380 Tryptophan metabolism 4
hvu00350 Tyrosine metabolism 3
hvu00950 Isoquinoline alkaloid biosynthesis 3
hvu00940 Phenylpropanoid biosynthesis 2
hvu00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu01230 Biosynthesis of amino acids 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi01230 Biosynthesis of amino acids 5
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi00300 Lysine biosynthesis 4
sbi00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi03010 Ribosome 7
bdi00250 Alanine, aspartate and glutamate metabolism 3
bdi00300 Lysine biosynthesis 3
bdi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi03010 Ribosome 4
bdi00250 Alanine, aspartate and glutamate metabolism 3
bdi00300 Lysine biosynthesis 3
bdi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre01210 2-Oxocarboxylic acid metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103854764 103861095 103834462 106439752 106365194 106361092 815864 829510 107938864 102623766 102619865 100791895 100801405 100807796 100267796 18099211 7469666 11434331 11416415 101252192 101252842 102597847 102580299 107811239 107784853 107781072 4332563 4331930 103632470 100283445 123154437 123085627 123098411 123449441 123448864 8084016 8081893 100827448 100834072 5718617
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