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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103854906   protein TRANSPARENT TESTA 16-like 
 mtr-u.5   11433884   protein TRANSPARENT TESTA 16 
 osa-u.5   4336981   MADS-box transcription factor 31-like 

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Top 50 coexpressed genes to 103854906 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103854906 (bra-r.6 coexpression data)

CoexMap"103854906"


braLOC103854906 | Entrez gene ID : 103854906    
Species bra mtr osa hvu zma sly ghi ath gma bna sbi vvi cit ppo bdi nta tae cre sot
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (248 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (391 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (478 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
Protein XP_009130118.1 [sequence] [blastp]
XP_009130119.2 [sequence] [blastp]
XP_009130120.1 [sequence] [blastp]
XP_033140471.1 [sequence] [blastp]
XP_033140472.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_009130118.1)
nucl 9,  cyto 1  (predict for XP_009130119.2)
nucl 9  (predict for XP_009130120.1)
nucl 9  (predict for XP_033140471.1)
nucl 9  (predict for XP_033140472.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009130118.1)
other 9  (predict for XP_009130119.2)
other 8  (predict for XP_009130120.1)
other 8  (predict for XP_033140471.1)
other 8  (predict for XP_033140472.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103854906
mtr-u.5
for
11433884
osa-u.5
for
4336981


Ortholog ID: 3264
Species bra bna bna ghi ghi cit mtr osa bdi
Symbol LOC103854906 LOC106380103 LOC106366053 LOC107894052 LOC107918783 LOC102614986 LOC11433884 LOC4336981 LOC100822441
Function* protein TRANSPARENT TESTA 16-like protein TRANSPARENT TESTA 16 protein TRANSPARENT TESTA 16 protein TRANSPARENT TESTA 16-like protein TRANSPARENT TESTA 16-like MADS-box protein defh21-like protein TRANSPARENT TESTA 16 MADS-box transcription factor 31-like MADS-box transcription factor 29-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00053 Ascorbate and aldarate metabolism 2
osa00480 Glutathione metabolism 2
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103854906 106380103 106366053 107894052 107918783 102614986 11433884 4336981 100822441
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