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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103855007   protein EMBRYO DEFECTIVE 514 
 bra-r.6   103874678   protein EMBRYO DEFECTIVE 514 
 bna-r.1   125605568   protein EMBRYO DEFECTIVE 514-like 
 bna-r.1   106375443   protein EMBRYO DEFECTIVE 514 
 bna-r.1   106369017   protein EMBRYO DEFECTIVE 514-like 
 ath-u.5   AT5G62440   EMB514 (DUF3223) 
 ghi-r.1   107949821   protein EMBRYO DEFECTIVE 514 
 ghi-r.1   107910915   protein EMBRYO DEFECTIVE 514-like 
 ghi-r.1   121209626   protein EMBRYO DEFECTIVE 514 
 cit-r.1   102627947   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100796421   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100804514   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100810172   protein EMBRYO DEFECTIVE 514 
 vvi-u.5   100255290   protein EMBRYO DEFECTIVE 514 
 ppo-u.5   18098785   protein EMBRYO DEFECTIVE 514 
 ppo-u.5   7473294   protein EMBRYO DEFECTIVE 514 
 mtr-u.5   25480442   protein EMBRYO DEFECTIVE 514 
 mtr-u.5   25490413   protein EMBRYO DEFECTIVE 514 
 sly-u.5   101250203   protein EMBRYO DEFECTIVE 514 
 sly-u.5   101255109   protein EMBRYO DEFECTIVE 514 
 sot-r.1   102599571   protein DCL, chloroplastic-like 
 sot-r.1   102584305   protein DCL, chloroplastic-like 
 nta-r.1   107821465   protein DCL, chloroplastic 
 nta-r.1   107813987   protein EMBRYO DEFECTIVE 514-like 
 nta-r.1   107783260   protein EMBRYO DEFECTIVE 514-like 
 osa-u.5   4331875   protein EMBRYO DEFECTIVE 514 
 zma-u.5   100277882   uncharacterized LOC100277882 
 zma-u.5   100278469   uncharacterized LOC100278469 
 tae-r.2   123084675   protein EMBRYO DEFECTIVE 514 
 tae-r.2   123098711   protein EMBRYO DEFECTIVE 514 
 tae-r.2   123093434   protein EMBRYO DEFECTIVE 514 
 hvu-r.1   123449656   protein EMBRYO DEFECTIVE 514 
 sbi-r.1   8057645   protein EMBRYO DEFECTIVE 514 
 bdi-r.1   100825450   protein EMBRYO DEFECTIVE 514 
 cre-r.1   CHLRE_02g085950v5   uncharacterized protein 

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Top 50 coexpressed genes to 103855007 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103855007 (bra-r.6 coexpression data)

CoexMap"103855007"


braLOC103855007 | Entrez gene ID : 103855007    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 1 3 1 2 2 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (6 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (90 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (845 genes)  IEA  
GO MF
Protein XP_009130215.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cysk 1,  nucl 1,  mito 1,  cysk_plas 1  (predict for XP_009130215.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009130215.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103855007
bra-r.6
for
103874678
bna-r.1
for
125605568
bna-r.1
for
106375443
bna-r.1
for
106369017
ath-u.5
for
AT5G62440
ghi-r.1
for
107949821
ghi-r.1
for
107910915
ghi-r.1
for
121209626
cit-r.1
for
102627947
gma-u.5
for
100796421
gma-u.5
for
100804514
gma-u.5
for
100810172
vvi-u.5
for
100255290
ppo-u.5
for
18098785
ppo-u.5
for
7473294
mtr-u.5
for
25480442
mtr-u.5
for
25490413
sly-u.5
for
101250203
sly-u.5
for
101255109
sot-r.1
for
102599571
sot-r.1
for
102584305
nta-r.1
for
107821465
nta-r.1
for
107813987
nta-r.1
for
107783260
osa-u.5
for
4331875
zma-u.5
for
100277882
zma-u.5
for
100278469
tae-r.2
for
123084675
tae-r.2
for
123098711
tae-r.2
for
123093434
hvu-r.1
for
123449656
sbi-r.1
for
8057645
bdi-r.1
for
100825450
cre-r.1
for
CHLRE_02g085950v5


Ortholog ID: 4455
Species bra bra bna bna bna ath ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC103855007 LOC103874678 LOC125605568 LOC106375443 LOC106351798 AT5G62440 LOC107910915 LOC121202960 LOC102627947 LOC100796421 LOC100804514 LOC100305757 LOC100255290 LOC18098785 LOC7473294 LOC25480442 LOC25490413 LOC101250203 LOC101255109 LOC102599571 LOC102584305 LOC107821465 LOC107813987 LOC107783260 LOC4331875 LOC100277882 LOC100278469 LOC123084675 LOC123098711 LOC123093434 LOC123449656 LOC8057645 LOC100825450 CHLRE_02g085950v5
Function* protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514-like EMB514 (DUF3223) protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 uncharacterized LOC100305757 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein DCL, chloroplastic-like protein DCL, chloroplastic-like protein DCL, chloroplastic protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514 uncharacterized LOC100277882 uncharacterized LOC100278469 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03040 Spliceosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03082 ATP-dependent chromatin remodeling 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103855007 103874678 125605568 106375443 106351798 836365 107910915 121202960 102627947 100796421 100804514 100305757 100255290 18098785 7473294 25480442 25490413 101250203 101255109 102599571 102584305 107821465 107813987 107783260 4331875 100277882 100278469 123084675 123098711 123093434 123449656 8057645 100825450 66052286
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