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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7473294   protein EMBRYO DEFECTIVE 514 
 ppo-r.4   7473294   protein EMBRYO DEFECTIVE 514 
 ppo-m.4   7473294   protein EMBRYO DEFECTIVE 514 
 ppo-u.5   18098785   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100804514   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100810172   protein EMBRYO DEFECTIVE 514 
 gma-u.5   100796421   protein EMBRYO DEFECTIVE 514 
 mtr-u.5   25490413   protein EMBRYO DEFECTIVE 514 
 mtr-u.5   25480442   protein EMBRYO DEFECTIVE 514 
 ath-u.5   AT5G62440   EMB514 (DUF3223) 
 vvi-u.5   100255290   protein EMBRYO DEFECTIVE 514 
 sly-u.5   101255109   protein EMBRYO DEFECTIVE 514 
 sly-u.5   101250203   protein EMBRYO DEFECTIVE 514 
 osa-u.5   4331875   protein EMBRYO DEFECTIVE 514 
 zma-u.5   100277882   uncharacterized LOC100277882 
 zma-u.5   100278469   uncharacterized LOC100278469 

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Top 50 coexpressed genes to 7473294 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7473294 (ppo-u.5 coexpression data)

CoexMap"7473294"


ppoLOC7473294 | Entrez gene ID : 7473294    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 3 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (8 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
Protein XP_052302465.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_052302465.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052302465.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7473294

.
ppo-r.4
for
7473294

.
ppo-m.4
for
7473294

.
ppo-u.5
for
18098785

.
gma-u.5
for
100804514

.
gma-u.5
for
100810172

.
gma-u.5
for
100796421

.
mtr-u.5
for
25490413

.
mtr-u.5
for
25480442

.
ath-u.5
for
AT5G62440

.
vvi-u.5
for
100255290

.
sly-u.5
for
101255109

.
sly-u.5
for
101250203

.
osa-u.5
for
4331875

.
zma-u.5
for
100277882

.
zma-u.5
for
100278469

.


Ortholog ID: 4455
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G62440 LOC100796421 LOC100305757 LOC101250203 LOC101255109 LOC4331875 LOC100277882 LOC100278469 LOC103874678 LOC103855007 LOC100255290 LOC18098785 LOC7473294 LOC25490413 LOC25480442 LOC123098711 LOC123084675 LOC123449656 LOC107910915 LOC106375443 LOC106351798 CHLRE_02g085950v5 LOC8057645 LOC102599571 LOC102584305 LOC102627947 LOC100825450 LOC107783260 LOC107813987
Function* EMB514 (DUF3223) protein EMBRYO DEFECTIVE 514 uncharacterized LOC100305757 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 uncharacterized LOC100277882 uncharacterized LOC100278469 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514-like uncharacterized protein protein EMBRYO DEFECTIVE 514 protein DCL, chloroplastic-like protein DCL, chloroplastic-like protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514 protein EMBRYO DEFECTIVE 514-like protein EMBRYO DEFECTIVE 514-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03040 Spliceosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03082 ATP-dependent chromatin remodeling 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836365 100796421 100305757 101250203 101255109 4331875 100277882 100278469 103874678 103855007 100255290 18098785 7473294 25490413 25480442 123098711 123084675 123449656 107910915 106375443 106351798 66052286 8057645 102599571 102584305 102627947 100825450 107783260 107813987
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