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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103856728   D-amino-acid transaminase, chloroplastic 
 ath-u.5   ADCL   D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein 
 gma-u.5   100806511   D-amino-acid transaminase, chloroplastic 
 gma-u.5   100794026   D-amino-acid transaminase, chloroplastic 
 vvi-u.5   100266456   D-amino-acid transaminase, chloroplastic 
 vvi-u.5   100255645   D-amino-acid transaminase, chloroplastic 
 ppo-u.5   7460800   D-amino-acid transaminase, chloroplastic 
 ppo-u.5   7462938   D-amino-acid transaminase, chloroplastic 
 mtr-u.5   25487305   D-amino-acid transaminase, chloroplastic 
 mtr-u.5   25482253   D-amino-acid transaminase, chloroplastic 
 sly-u.5   778238   4-amino-4-deoxychorismate lyase 
 sly-u.5   101261729   D-amino-acid transaminase, chloroplastic-like 
 osa-u.5   4338203   D-amino-acid transaminase, chloroplastic 
 osa-u.5   4328992   D-amino-acid transaminase, chloroplastic 
 osa-u.5   4326358   D-amino-acid transaminase, chloroplastic 
 zma-u.5   103626932   D-amino-acid transaminase, chloroplastic 
 zma-u.5   100192017   uncharacterized LOC100192017 

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Top 50 coexpressed genes to 103856728 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103856728 (bra-r.6 coexpression data)

CoexMap"103856728"


braLOC103856728 | Entrez gene ID : 103856728    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 2 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00790 [list] [network] Folate biosynthesis (39 genes)
brp01240 [list] [network] Biosynthesis of cofactors (357 genes)
GO BP
GO:0019752 [list] [network] carboxylic acid metabolic process  (854 genes)  IEA  
GO CC
GO MF
GO:0003824 [list] [network] catalytic activity  (12319 genes)  IEA  
Protein XP_009132102.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1  (predict for XP_009132102.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_009132102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103856728
ath-u.5
for
ADCL
gma-u.5
for
100806511
gma-u.5
for
100794026
vvi-u.5
for
100266456
vvi-u.5
for
100255645
ppo-u.5
for
7460800
ppo-u.5
for
7462938
mtr-u.5
for
25487305
mtr-u.5
for
25482253
sly-u.5
for
778238
sly-u.5
for
101261729
osa-u.5
for
4338203
osa-u.5
for
4328992
osa-u.5
for
4326358
zma-u.5
for
103626932
zma-u.5
for
100192017


Ortholog ID: 3737
Species bra bna bna ath ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC103856728 LOC106436782 LOC125598943 ADCL LOC107901554 LOC102618166 LOC102619799 LOC100806511 LOC100798871 LOC100255645 LOC100266456 LOC7462938 LOC7460800 LOC25482253 LOC25487305 LOC101261729 LOC778238 LOC102587211 LOC102598500 LOC107826702 LOC107768109 LOC4338203 LOC4328992 LOC100192017 LOC103626932 LOC123136809 LOC123077932 LOC123403598 LOC123439700 LOC8066657 LOC8059092 LOC100846388 LOC100841858 CHLRE_13g576400v5
Function* D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic-like D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic pyridoxaL 5'-phosphate dependent enzymes class IV superfamily protein D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic-like 4-amino-4-deoxychorismate lyase D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic uncharacterized LOC100192017 D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic-like D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic D-amino-acid transaminase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna03010 Ribosome 4
bna00790 Folate biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 2
ath01200 Carbon metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 4
gma00710 Carbon fixation by Calvin cycle 4
gma01200 Carbon metabolism 4
gma01230 Biosynthesis of amino acids 4
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00071 Fatty acid degradation 2
vvi01240 Biosynthesis of cofactors 2
vvi00330 Arginine and proline metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00071 Fatty acid degradation 2
vvi01212 Fatty acid metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00071 Fatty acid degradation 3
ppo01200 Carbon metabolism 3
ppo00280 Valine, leucine and isoleucine degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
ppo01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00051 Fructose and mannose metabolism 2
sly00052 Galactose metabolism 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly01210 2-Oxocarboxylic acid metabolism 5
sly01240 Biosynthesis of cofactors 3
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00790 Folate biosynthesis 2
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00232 Caffeine metabolism 2
nta00562 Inositol phosphate metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 3
osa00071 Fatty acid degradation 3
osa03082 ATP-dependent chromatin remodeling 2
osa03083 Polycomb repressive complex 2
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00790 Folate biosynthesis 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae00940 Phenylpropanoid biosynthesis 2
tae00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
sbi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103856728 106436782 125598943 835895 107901554 102618166 102619799 100806511 100798871 100255645 100266456 7462938 7460800 25482253 25487305 101261729 778238 102587211 102598500 107826702 107768109 4338203 4328992 100192017 103626932 123136809 123077932 123403598 123439700 8066657 8059092 100846388 100841858 5719241
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