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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103857726   scarecrow-like protein 9 
 bra-r.6   103873732   scarecrow-like protein 30 
 bra-r.6   103845369   scarecrow-like protein 11 
 bra-r.6   103836438   scarecrow-like protein 14 
 bna-r.1   106418387   scarecrow-like protein 11 
 bna-r.1   106376460   scarecrow-like protein 30 
 bna-r.1   106362204   scarecrow-like protein 14 
 ath-u.5   AT2G37650   GRAS family transcription factor 
 ath-u.5   AT3G46600   GRAS family transcription factor 
 ath-u.5   AT5G59450   GRAS family transcription factor 
 ghi-r.1   107940028   scarecrow-like protein 33 
 ghi-r.1   107930046   scarecrow-like protein 9 
 ghi-r.1   107906564   scarecrow-like protein 33 
 cit-r.1   102621708   scarecrow-like protein 30 
 cit-r.1   102622070   scarecrow-like protein 9 
 cit-r.1   102623679   scarecrow-like protein 33 
 gma-u.5   100807788   scarecrow-like protein 9 
 gma-u.5   100801824   scarecrow-like protein 9 
 gma-u.5   100796903   scarecrow-like protein 14 
 vvi-u.5   100264982   scarecrow-like protein 30 
 vvi-u.5   100241120   scarecrow-like protein 14 
 ppo-u.5   7467554   scarecrow-like protein 9 
 ppo-u.5   7488108   scarecrow-like protein 33 
 ppo-u.5   7465105   scarecrow-like protein 14 
 mtr-u.5   11408765   scarecrow-like protein 14 
 mtr-u.5   25498496   scarecrow-like protein 9 
 mtr-u.5   25487897   scarecrow-like protein 11 
 sly-u.5   GRAS4   GRAS4 
 sly-u.5   101246637   scarecrow-like protein 14 
 sly-u.5   101246721   scarecrow-like protein 14 
 sot-r.1   102599923   scarecrow-like protein 9 
 sot-r.1   102599068   scarecrow-like protein 14 
 nta-r.1   107826445   scarecrow-like protein 14 
 nta-r.1   107818913   scarecrow-like protein 30 
 nta-r.1   107761047   scarecrow-like protein 9 
 osa-u.5   4327499   scarecrow-like protein 9 
 osa-u.5   4333775   scarecrow-like protein 9 
 osa-u.5   4336820   scarecrow-like protein 9 
 zma-u.5   100279528   SCARECROW-like protein 
 zma-u.5   100381402   uncharacterized LOC100381402 
 tae-r.2   123079718   scarecrow-like protein 9 
 tae-r.2   123071381   scarecrow-like protein 9 
 hvu-r.1   123453058   scarecrow-like protein 9 
 hvu-r.1   123444921   scarecrow-like protein 9 
 sbi-r.1   8064560   scarecrow-like protein 9 
 bdi-r.1   100824633   scarecrow-like protein 9 
 bdi-r.1   100843948   scarecrow-like protein 9 
 bdi-r.1   104581531   scarecrow-like protein 9 

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Top 50 coexpressed genes to 103857726 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103857726 (bra-r.6 coexpression data)

CoexMap"103857726"


braLOC103857726 | Entrez gene ID : 103857726    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 2 3 3 3 2 3 3 2 2 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1199 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1840 genes)  IEA  
Protein XP_009133198.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_009133198.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009133198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103857726
bra-r.6
for
103873732
bra-r.6
for
103845369
bra-r.6
for
103836438
bna-r.1
for
106418387
bna-r.1
for
106376460
bna-r.1
for
106362204
ath-u.5
for
AT2G37650
ath-u.5
for
AT3G46600
ath-u.5
for
AT5G59450
ghi-r.1
for
107940028
ghi-r.1
for
107930046
ghi-r.1
for
107906564
cit-r.1
for
102621708
cit-r.1
for
102622070
cit-r.1
for
102623679
gma-u.5
for
100807788
gma-u.5
for
100801824
gma-u.5
for
100796903
vvi-u.5
for
100264982
vvi-u.5
for
100241120
ppo-u.5
for
7467554
ppo-u.5
for
7488108
ppo-u.5
for
7465105
mtr-u.5
for
11408765
mtr-u.5
for
25498496
mtr-u.5
for
25487897
sly-u.5
for
GRAS4
sly-u.5
for
101246637
sly-u.5
for
101246721
sot-r.1
for
102599923
sot-r.1
for
102599068
nta-r.1
for
107826445
nta-r.1
for
107818913
nta-r.1
for
107761047
osa-u.5
for
4327499
osa-u.5
for
4333775
osa-u.5
for
4336820
zma-u.5
for
100279528
zma-u.5
for
100381402
tae-r.2
for
123079718
tae-r.2
for
123071381
hvu-r.1
for
123453058
hvu-r.1
for
123444921
sbi-r.1
for
8064560
bdi-r.1
for
100824633
bdi-r.1
for
100843948
bdi-r.1
for
104581531


Ortholog ID: 352
Species bra bra bra bna bna bna ath ath ath ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma sbi sbi sbi bdi bdi
Symbol LOC103857726 LOC103873732 LOC103836438 LOC106376460 LOC125601294 LOC106420491 AT3G46600 SCL14 AT2G29065 LOC107906564 LOC107900465 LOC102621708 LOC102622070 LOC102623679 LOC100807788 LOC100801824 LOC121173030 LOC100264982 LOC100252795 LOC7467554 LOC7487261 LOC7485697 LOC25487897 LOC25487896 LOC25487898 LOC101246721 LOC101249397 LOC101256274 LOC102598749 LOC102585418 LOC102606191 LOC107826445 LOC107806277 LOC107802916 LOC4327499 LOC4336820 LOC103644258 LOC100216906 LOC8064560 LOC8058890 LOC8057357 LOC100824633 LOC104581531
Function* scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 14 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 11 GRAS family transcription factor SCARECROW-like 14 GRAS family transcription factor scarecrow-like protein 33 scarecrow-like protein 30 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 33 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 31 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 33 scarecrow-like protein 11 scarecrow-like protein 30 scarecrow-like protein 30 scarecrow-like protein 14 scarecrow-like protein 9 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 14 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 30 uncharacterized LOC100216906 scarecrow-like protein 9 scarecrow-like protein 9 scarecrow-like protein 30 scarecrow-like protein 9 scarecrow-like protein 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra03018 RNA degradation 3
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
bna04075 Plant hormone signal transduction 6
bna03250 Viral life cycle - HIV-1 4
bna03272 Virion - Hepatitis viruses 4
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 7
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
vvi00010 Glycolysis / Gluconeogenesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 9
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 4
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103857726 103873732 103836438 106376460 125601294 106420491 823813 837267 10723125 107906564 107900465 102621708 102622070 102623679 100807788 100801824 121173030 100264982 100252795 7467554 7487261 7485697 25487897 25487896 25487898 101246721 101249397 101256274 102598749 102585418 102606191 107826445 107806277 107802916 4327499 4336820 103644258 100216906 8064560 8058890 8057357 100824633 104581531
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