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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103857896   60S acidic ribosomal protein P0-1 
 bra-r.6   103859308   60S acidic ribosomal protein P0-2 
 bra-r.6   103848258   60S acidic ribosomal protein P0-2 
 bra-r.6   103870557   60S acidic ribosomal protein P0-2 
 bna-r.1   125580405   60S acidic ribosomal protein P0-2-like 
 bna-r.1   106439210   60S acidic ribosomal protein P0-2 
 bna-r.1   111215793   60S acidic ribosomal protein P0-2-like 
 ath-u.5   AT2G40010   Ribosomal protein L10 family protein 
 ath-u.5   AT3G09200   Ribosomal protein L10 family protein 
 ath-u.5   AT3G11250   Ribosomal protein L10 family protein 
 ghi-r.1   107920373   60S acidic ribosomal protein P0 
 ghi-r.1   107928766   60S acidic ribosomal protein P0-2 
 ghi-r.1   107934983   60S acidic ribosomal protein P0 
 cit-r.1   102614468   60S acidic ribosomal protein P0 
 gma-u.5   547816   acidic ribosomal protein P0 
 gma-u.5   100777482   60S acidic ribosomal protein P0-like 
 vvi-u.5   100250067   large ribosomal subunit protein uL10 
 vvi-u.5   100254737   large ribosomal subunit protein uL10 
 ppo-u.5   112328511   60S acidic ribosomal protein P0 
 ppo-u.5   7474450   60S acidic ribosomal protein P0 
 mtr-u.5   11406082   60S acidic ribosomal protein P0 
 mtr-u.5   25483013   60S acidic ribosomal protein P0 
 mtr-u.5   11436630   60S acidic ribosomal protein P0 
 sly-u.5   101268804   large ribosomal subunit protein uL10-like 
 sly-u.5   101261521   large ribosomal subunit protein uL10 
 sly-u.5   101258269   large ribosomal subunit protein uL10-like 
 sot-r.1   102578519   60S acidic ribosomal protein P0-like 
 nta-r.1   107813610   large ribosomal subunit protein uL10z-like 
 nta-r.1   107801773   large ribosomal subunit protein uL10z-like 
 nta-r.1   107785919   large ribosomal subunit protein uL10 
 osa-u.5   9270965   large ribosomal subunit protein uL10-like 
 osa-u.5   9266027   large ribosomal subunit protein uL10-like 
 osa-u.5   60SP0   60S acidic ribosomal protein P0-like 
 zma-u.5   542454   60S acidic ribosomal protein P0 
 zma-u.5   100273601   60S acidic ribosomal protein P0-2 
 tae-r.2   123169837   60S acidic ribosomal protein P0 
 tae-r.2   123162195   60S acidic ribosomal protein P0 
 tae-r.2   123147454   60S acidic ribosomal protein P0 
 hvu-r.1   123412650   60S acidic ribosomal protein P0 
 sbi-r.1   8074077   60S acidic ribosomal protein P0 
 sbi-r.1   8063582   60S acidic ribosomal protein P0 
 bdi-r.1   100835745   60S acidic ribosomal protein P0 
 bdi-r.1   104583534   60S acidic ribosomal protein P0 
 cre-r.1   CHLRE_12g520500v5   uncharacterized protein 

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Top 50 coexpressed genes to 103857896 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103857896 (bra-r.6 coexpression data)

CoexMap"103857896"


braLOC103857896 | Entrez gene ID : 103857896    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 2 2 2 3 3 1 3 3 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03010 [list] [network] Ribosome (2036 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (52 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (136 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (476 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (240 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (24 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
Protein XP_009133397.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 2  (predict for XP_009133397.1)
Subcellular
localization
TargetP
scret 8,  other 3  (predict for XP_009133397.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103857896
bra-r.6
for
103859308
bra-r.6
for
103848258
bra-r.6
for
103870557
bna-r.1
for
125580405
bna-r.1
for
106439210
bna-r.1
for
111215793
ath-u.5
for
AT2G40010
ath-u.5
for
AT3G09200
ath-u.5
for
AT3G11250
ghi-r.1
for
107920373
ghi-r.1
for
107928766
ghi-r.1
for
107934983
cit-r.1
for
102614468
gma-u.5
for
547816
gma-u.5
for
100777482
vvi-u.5
for
100250067
vvi-u.5
for
100254737
ppo-u.5
for
112328511
ppo-u.5
for
7474450
mtr-u.5
for
11406082
mtr-u.5
for
25483013
mtr-u.5
for
11436630
sly-u.5
for
101268804
sly-u.5
for
101261521
sly-u.5
for
101258269
sot-r.1
for
102578519
nta-r.1
for
107813610
nta-r.1
for
107801773
nta-r.1
for
107785919
osa-u.5
for
9270965
osa-u.5
for
9266027
osa-u.5
for
60SP0
zma-u.5
for
542454
zma-u.5
for
100273601
tae-r.2
for
123169837
tae-r.2
for
123162195
tae-r.2
for
123147454
hvu-r.1
for
123412650
sbi-r.1
for
8074077
sbi-r.1
for
8063582
bdi-r.1
for
100835745
bdi-r.1
for
104583534
cre-r.1
for
CHLRE_12g520500v5


Ortholog ID: 2458
Species bra bra bra bna bna bna ath ath ath ghi ghi ghi cit gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot nta nta nta osa osa osa zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol LOC103859308 LOC103848258 LOC103870557 LOC125580405 LOC106439210 LOC106427969 AT2G40010 AT3G09200 AT3G11250 LOC107934983 LOC107950365 LOC107960342 LOC102614468 LOC547816 LOC100777482 LOC100250067 LOC100254737 LOC112328511 LOC7474450 LOC11406082 LOC25483013 LOC11436630 LOC101268804 LOC101261521 LOC101258269 LOC102578519 LOC107801773 LOC107785919 LOC107772468 LOC9270965 LOC9266027 60SP0 LOC542454 LOC100273601 LOC123169837 LOC123162195 LOC123412650 LOC8074077 LOC8063582 LOC100835745 LOC104583534 CHLRE_12g520500v5
Function* 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2-like 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2 Ribosomal protein L10 family protein Ribosomal protein L10 family protein Ribosomal protein L10 family protein 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 acidic ribosomal protein P0 60S acidic ribosomal protein P0-like large ribosomal subunit protein uL10 large ribosomal subunit protein uL10 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 large ribosomal subunit protein uL10-like large ribosomal subunit protein uL10 large ribosomal subunit protein uL10-like 60S acidic ribosomal protein P0-like large ribosomal subunit protein uL10z-like large ribosomal subunit protein uL10 large ribosomal subunit protein uL10 large ribosomal subunit protein uL10-like large ribosomal subunit protein uL10-like 60S acidic ribosomal protein P0-like 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03015 mRNA surveillance pathway 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00230 Purine metabolism 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03015 mRNA surveillance pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly03013 Nucleocytoplasmic transport 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03013 Nucleocytoplasmic transport 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03013 Nucleocytoplasmic transport 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi04120 Ubiquitin mediated proteolysis 5
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 16
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103859308 103848258 103870557 125580405 106439210 106427969 818589 820076 820296 107934983 107950365 107960342 102614468 547816 100777482 100250067 100254737 112328511 7474450 11406082 25483013 11436630 101268804 101261521 101258269 102578519 107801773 107785919 107772468 9270965 9266027 4344590 542454 100273601 123169837 123162195 123412650 8074077 8063582 100835745 104583534 5722589
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