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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103859653   pentatricopeptide repeat-containing protein At3g16010 
 bna-r.1   106402659   pentatricopeptide repeat-containing protein At3g16010 
 bna-r.1   106439435   pentatricopeptide repeat-containing protein At3g16010 
 ath-u.5   AT3G16010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ghi-r.1   107924121   pentatricopeptide repeat-containing protein At3g16010 
 ghi-r.1   107937345   pentatricopeptide repeat-containing protein At3g16010 
 cit-r.1   102609570   pentatricopeptide repeat-containing protein At3g16010 
 gma-u.5   100793425   pentatricopeptide repeat-containing protein At3g16010 
 vvi-u.5   100249769   pentatricopeptide repeat-containing protein At3g16010 
 ppo-u.5   7472977   pentatricopeptide repeat-containing protein At3g16010 
 mtr-u.5   11431556   pentatricopeptide repeat-containing protein At3g16010 
 sly-u.5   101252669   pentatricopeptide repeat-containing protein At3g16010 
 sot-r.1   102601708   pentatricopeptide repeat-containing protein At3g16010 
 nta-r.1   107824157   pentatricopeptide repeat-containing protein At3g16010 
 nta-r.1   107804173   pentatricopeptide repeat-containing protein At3g16010 
 osa-u.5   4328959   pentatricopeptide repeat-containing protein At3g16010 
 zma-u.5   103639844   pentatricopeptide repeat-containing protein At3g16010 
 tae-r.2   123112237   pentatricopeptide repeat-containing protein At3g16010 
 tae-r.2   123121750   pentatricopeptide repeat-containing protein At3g16010 
 tae-r.2   123104000   pentatricopeptide repeat-containing protein At3g16010 
 hvu-r.1   123398765   pentatricopeptide repeat-containing protein At3g16010 
 sbi-r.1   8059070   pentatricopeptide repeat-containing protein At3g16010 
 sbi-r.1   8068596   pentatricopeptide repeat-containing protein At3g16010 
 bdi-r.1   100842347   pentatricopeptide repeat-containing protein At3g16010 

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Top 50 coexpressed genes to 103859653 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103859653 (bra-r.6 coexpression data)

CoexMap"103859653"


braLOC103859653 | Entrez gene ID : 103859653    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 2 1 1 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009135469.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_009135469.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_009135469.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103859653
bna-r.1
for
106402659
bna-r.1
for
106439435
ath-u.5
for
AT3G16010
ghi-r.1
for
107924121
ghi-r.1
for
107937345
cit-r.1
for
102609570
gma-u.5
for
100793425
vvi-u.5
for
100249769
ppo-u.5
for
7472977
mtr-u.5
for
11431556
sly-u.5
for
101252669
sot-r.1
for
102601708
nta-r.1
for
107824157
nta-r.1
for
107804173
osa-u.5
for
4328959
zma-u.5
for
103639844
tae-r.2
for
123112237
tae-r.2
for
123121750
tae-r.2
for
123104000
hvu-r.1
for
123398765
sbi-r.1
for
8059070
sbi-r.1
for
8068596
bdi-r.1
for
100842347


Ortholog ID: 10771
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi
Symbol LOC103859653 LOC106402659 LOC106439435 AT3G16010 LOC107924121 LOC107937345 LOC102609570 LOC100793425 LOC100249769 LOC7472977 LOC11431556 LOC101252669 LOC102601708 LOC107824157 LOC107804173 LOC4328959 LOC103639844 LOC123112237 LOC123121750 LOC123104000 LOC123398765 LOC8059070 LOC8068596 LOC100842347
Function* pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103859653 106402659 106439435 820846 107924121 107937345 102609570 100793425 100249769 7472977 11431556 101252669 102601708 107824157 107804173 4328959 103639844 123112237 123121750 123104000 123398765 8059070 8068596 100842347
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