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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7472977   pentatricopeptide repeat-containing protein At3g16010 
 ppo-r.4   7472977   pentatricopeptide repeat-containing protein At3g16010 
 ppo-m.4   7472977   pentatricopeptide repeat-containing protein At3g16010 
 gma-u.5   100793425   pentatricopeptide repeat-containing protein At3g16010 
 mtr-u.5   11431556   pentatricopeptide repeat-containing protein At3g16010 
 ath-u.5   AT3G16010   Pentatricopeptide repeat (PPR-like) superfamily protein 
 vvi-u.5   100249769   pentatricopeptide repeat-containing protein At3g16010 
 sly-u.5   101252669   pentatricopeptide repeat-containing protein At3g16010 
 osa-u.5   4328959   pentatricopeptide repeat-containing protein At3g16010 
 zma-u.5   103639844   pentatricopeptide repeat-containing protein At3g16010 

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Top 50 coexpressed genes to 7472977 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7472977 (ppo-u.5 coexpression data)

CoexMap"7472977"


ppoLOC7472977 | Entrez gene ID : 7472977    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002299640.3 [sequence] [blastp]
XP_052304574.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_002299640.3)
chlo 8,  mito 2  (predict for XP_052304574.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_002299640.3)
scret 3  (predict for XP_052304574.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7472977

.
ppo-r.4
for
7472977

.
ppo-m.4
for
7472977

.
gma-u.5
for
100793425

.
mtr-u.5
for
11431556

.
ath-u.5
for
AT3G16010

.
vvi-u.5
for
100249769

.
sly-u.5
for
101252669

.
osa-u.5
for
4328959

.
zma-u.5
for
103639844

.


Ortholog ID: 10771
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol AT3G16010 LOC100793425 LOC101252669 LOC4328959 LOC103639844 LOC103859653 LOC100249769 LOC7472977 LOC11431556 LOC123104000 LOC123112237 LOC123398765 LOC107937345 LOC107924121 LOC106439435 LOC106402659 LOC8059070 LOC8068596 LOC102601708 LOC102609570 LOC100842347 LOC107804173 LOC107824157
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010 pentatricopeptide repeat-containing protein At3g16010
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820846 100793425 101252669 4328959 103639844 103859653 100249769 7472977 11431556 123104000 123112237 123398765 107937345 107924121 106439435 106402659 8059070 8068596 102601708 102609570 100842347 107804173 107824157
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