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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   CCA1   cataract, congenital, cerulean type, 1 
 bna-r.1   106416040   protein CCA1 
 bna-r.1   106450471   protein CCA1 
 ath-u.5   CCA1   circadian clock associated 1 

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Top 50 coexpressed genes to CCA1 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CCA1 (bra-r.6 coexpression data)

CoexMap"103866427"


braCCA1 | Entrez gene ID : 103866427      
Species bra bna ath cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp04712 [list] [network] Circadian rhythm - plant (74 genes)
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3159 genes)  IEA  
Protein NP_001288869.1 [sequence] [blastp]
XP_009142593.1 [sequence] [blastp]
XP_009142594.1 [sequence] [blastp]
XP_033146768.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001288869.1)
nucl 10  (predict for XP_009142593.1)
nucl 10  (predict for XP_009142594.1)
nucl 10  (predict for XP_033146768.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001288869.1)
other 9  (predict for XP_009142593.1)
other 9  (predict for XP_009142594.1)
other 9  (predict for XP_033146768.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
CCA1
bna-r.1
for
106416040
bna-r.1
for
106450471
ath-u.5
for
CCA1


Ortholog ID: 22586
Species bra bna bna ath
Symbol CCA1 LOC106416040 LOC106450471 CCA1
Function* cataract, congenital, cerulean type, 1 protein CCA1 protein CCA1 circadian clock associated 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 3
bna00860 Porphyrin metabolism 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103866427 106416040 106450471 819296
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