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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103866955   laccase-5 
 ath-u.5   LAC3   laccase 3 
 ath-u.5   LAC5   laccase 5 
 ath-u.5   LAC12   laccase 12 
 gma-u.5   547704   diphenol oxidase laccase 
 gma-u.5   100797749   laccase-5 
 gma-u.5   100806093   laccase-3 
 vvi-u.5   100262045   laccase-12 
 ppo-u.5   7462100   laccase-12 
 ppo-u.5   7462101   laccase-12 
 ppo-u.5   7464613   laccase-12 
 mtr-u.5   11410085   laccase-3 
 mtr-u.5   11434534   laccase-5 
 mtr-u.5   11411380   laccase-12 
 sly-u.5   101262618   laccase-12 
 sly-u.5   101262313   laccase-12-like 
 sly-u.5   101251392   laccase-3-like 
 osa-u.5   4327522   laccase-3-like 
 osa-u.5   4349566   putative laccase-17 
 osa-u.5   4351276   laccase-23-like 
 zma-u.5   100282094   L-ascorbate oxidase 
 zma-u.5   100502492   putative laccase family protein 
 zma-u.5   103654275   laccase-23 

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Top 50 coexpressed genes to 103866955 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103866955 (bra-r.6 coexpression data)

CoexMap"103866955"


braLOC103866955 | Entrez gene ID : 103866955    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 3 3 1 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046274 [list] [network] lignin catabolic process  (27 genes)  IEA  
GO CC
GO:0048046 [list] [network] apoplast  (94 genes)  IEA  
GO MF
GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity  (27 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (98 genes)  IEA  
Protein XP_009143220.1 [sequence] [blastp]
XP_033146815.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  chlo 1,  E.R. 1,  golg 1,  cyto 1,  plas 1,  extr 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_009143220.1)
vacu 4,  chlo 1,  E.R. 1,  golg 1,  cyto 1,  plas 1,  extr 1,  chlo_mito 1,  cyto_plas 1  (predict for XP_033146815.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_009143220.1)
scret 9  (predict for XP_033146815.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103866955
ath-u.5
for
LAC3
ath-u.5
for
LAC5
ath-u.5
for
LAC12
gma-u.5
for
547704
gma-u.5
for
100797749
gma-u.5
for
100806093
vvi-u.5
for
100262045
ppo-u.5
for
7462100
ppo-u.5
for
7462101
ppo-u.5
for
7464613
mtr-u.5
for
11410085
mtr-u.5
for
11434534
mtr-u.5
for
11411380
sly-u.5
for
101262618
sly-u.5
for
101262313
sly-u.5
for
101251392
osa-u.5
for
4327522
osa-u.5
for
4349566
osa-u.5
for
4351276
zma-u.5
for
100282094
zma-u.5
for
100502492
zma-u.5
for
103654275


Ortholog ID: 825
Species bra bra bna bna ath ath ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi bdi
Symbol LOC103867971 LOC103866955 LOC106446093 LOC106419221 LAC13 LAC3 LOC107927043 LOC107962127 LOC102616340 LOC102609228 LOC100785427 LOC100796956 LOC100262045 LOC7464613 LOC7464614 LOC11434534 LOC11410085 LOC101262618 LOC101251392 LOC102578240 LOC102590317 LOC107783942 LOC107823893 LOC4351276 LOC4327522 LOC103654275 LOC100502492 LOC123071258 LOC123120487 LOC123397646 LOC123440584 LOC8085414 LOC100845885 LOC100835168
Function* laccase-3 laccase-5 laccase-13 laccase-12-like laccase 13 laccase 3 laccase-13 laccase-5 laccase-13 laccase-12-like laccase-3 laccase-5 laccase-12 laccase-12 laccase-12 laccase-5 laccase-3 laccase-12 laccase-3-like laccase-12-like laccase-3 laccase-12-like laccase-12 laccase-23-like laccase-3-like laccase-23 putative laccase family protein laccase-3 putative laccase-17 putative laccase-17 laccase-3 laccase-3 laccase-3 laccase-23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 4
bra00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 2
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
sot00073 Cutin, suberine and wax biosynthesis 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 3
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 3
tae02010 ABC transporters 3
tae04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi00073 Cutin, suberine and wax biosynthesis 2
sbi02010 ABC transporters 2
sbi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
bdi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103867971 103866955 106446093 106419221 830604 817571 107927043 107962127 102616340 102609228 100785427 100796956 100262045 7464613 7464614 11434534 11410085 101262618 101251392 102578240 102590317 107783942 107823893 4351276 4327522 103654275 100502492 123071258 123120487 123397646 123440584 8085414 100845885 100835168
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