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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106402957   E3 ubiquitin-protein ligase CHFR-like 
 ath-u.5   AT1G47570   RING/U-box superfamily protein 
 ghi-r.1   121216274   E3 ubiquitin-protein ligase CHFR 
 ghi-r.1   107937640   E3 ubiquitin-protein ligase CHFR 
 cit-r.1   102631195   uncharacterized LOC102631195 
 gma-u.5   100805618   E3 ubiquitin-protein ligase CHFR-like 
 vvi-u.5   100266579   uncharacterized LOC100266579 
 ppo-u.5   18097759   uncharacterized LOC18097759 
 mtr-u.5   11439528   E3 ubiquitin-protein ligase CHFR 
 sly-u.5   101267293   uncharacterized LOC101267293 
 sot-r.1   102590333   E3 ubiquitin-protein ligase CHFR 
 nta-r.1   107770615   uncharacterized LOC107770615 
 nta-r.1   107822045   uncharacterized LOC107822045 
 osa-u.5   4349917   uncharacterized LOC4349917 
 zma-u.5   100274308   putative RING zinc finger domain superfamily protein 
 tae-r.2   123096250   E3 ubiquitin-protein ligase CHFR 
 tae-r.2   123086719   E3 ubiquitin-protein ligase CHFR 
 tae-r.2   123091266   E3 ubiquitin-protein ligase CHFR 
 hvu-r.1   123447965   E3 ubiquitin-protein ligase CHFR 
 sbi-r.1   8073669   E3 ubiquitin-protein ligase CHFR 
 bdi-r.1   100839249   E3 ubiquitin-protein ligase CHFR 

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Top 50 coexpressed genes to 106402957 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106402957 (bna-r.1 coexpression data)

CoexMap"103867263"


braLOC103867263 | Entrez gene ID : 103867263    
Species bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007093 [list] [network] mitotic cell cycle checkpoint signaling  (37 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (435 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (531 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3068 genes)  IEA  
Protein XP_009143561.1 [sequence] [blastp]
XP_009143562.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_009143561.1)
nucl 7,  cyto 2  (predict for XP_009143562.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009143561.1)
other 8  (predict for XP_009143562.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106402957
ath-u.5
for
AT1G47570
ghi-r.1
for
121216274
ghi-r.1
for
107937640
cit-r.1
for
102631195
gma-u.5
for
100805618
vvi-u.5
for
100266579
ppo-u.5
for
18097759
mtr-u.5
for
11439528
sly-u.5
for
101267293
sot-r.1
for
102590333
nta-r.1
for
107770615
nta-r.1
for
107822045
osa-u.5
for
4349917
zma-u.5
for
100274308
tae-r.2
for
123096250
tae-r.2
for
123086719
tae-r.2
for
123091266
hvu-r.1
for
123447965
sbi-r.1
for
8073669
bdi-r.1
for
100839249


Ortholog ID: 11078
Species bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106402957 AT1G47570 LOC121216274 LOC107937640 LOC102631195 LOC100805618 LOC100266579 LOC18097759 LOC11439528 LOC101267293 LOC102590333 LOC107770615 LOC107822045 LOC4349917 LOC100274308 LOC123096250 LOC123086719 LOC123091266 LOC123447965 LOC8073669 LOC100839249
Function* E3 ubiquitin-protein ligase CHFR-like RING/U-box superfamily protein E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR uncharacterized LOC102631195 E3 ubiquitin-protein ligase CHFR-like uncharacterized LOC100266579 uncharacterized LOC18097759 E3 ubiquitin-protein ligase CHFR uncharacterized LOC101267293 E3 ubiquitin-protein ligase CHFR uncharacterized LOC107770615 uncharacterized LOC107822045 uncharacterized LOC4349917 putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04145 Phagosome 3
bdi04148 Efferocytosis 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106402957 841166 121216274 107937640 102631195 100805618 100266579 18097759 11439528 101267293 102590333 107770615 107822045 4349917 100274308 123096250 123086719 123091266 123447965 8073669 100839249
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