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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4349917   uncharacterized LOC4349917 
 osa-r.6   4349917   uncharacterized LOC4349917 
 osa-m.8   4349917   uncharacterized LOC4349917 
 osa-e.1   4349917   uncharacterized LOC4349917 
 zma-u.5   100274308   putative RING zinc finger domain superfamily protein 
 ath-u.5   AT1G47570   RING/U-box superfamily protein 
 gma-u.5   100805618   E3 ubiquitin-protein ligase CHFR-like 
 sly-u.5   101267293   uncharacterized LOC101267293 
 vvi-u.5   100266579   uncharacterized LOC100266579 
 ppo-u.5   18097759   uncharacterized LOC18097759 
 mtr-u.5   11439528   E3 ubiquitin-protein ligase CHFR 

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Top 50 coexpressed genes to 4349917 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4349917 (osa-u.5 coexpression data)

CoexMap"4349917"


osaLOC4349917 | Entrez gene ID : 4349917      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007093 [list] [network] mitotic cell cycle checkpoint signaling  (31 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (308 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (501 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (377 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2132 genes)  IEA  
Protein XP_015617470.1 [sequence] [blastp]
XP_015617471.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_015617470.1)
nucl 10  (predict for XP_015617471.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_015617470.1)
chlo 7,  other 5  (predict for XP_015617471.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4349917
osa-r.6
for
4349917
osa-m.8
for
4349917
osa-e.1
for
4349917
zma-u.5
for
100274308
ath-u.5
for
AT1G47570
gma-u.5
for
100805618
sly-u.5
for
101267293
vvi-u.5
for
100266579
ppo-u.5
for
18097759
mtr-u.5
for
11439528


Ortholog ID: 11078
Species osa tae tae hvu bdi zma sbi ath gma sly vvi ppo mtr ghi ghi bna sot cit nta nta
Symbol LOC4349917 LOC123091266 LOC123086719 LOC123447965 LOC100839249 LOC100274308 LOC8073669 AT1G47570 LOC100805618 LOC101267293 LOC100266579 LOC18097759 LOC11439528 LOC121216274 LOC107937640 LOC106402957 LOC102590333 LOC102631195 LOC107822045 LOC107770615
Function* uncharacterized LOC4349917 E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase CHFR RING/U-box superfamily protein E3 ubiquitin-protein ligase CHFR-like uncharacterized LOC101267293 uncharacterized LOC100266579 uncharacterized LOC18097759 E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR-like E3 ubiquitin-protein ligase CHFR uncharacterized LOC102631195 uncharacterized LOC107822045 uncharacterized LOC107770615
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04145 Phagosome 3
bdi04148 Efferocytosis 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4349917 123091266 123086719 123447965 100839249 100274308 8073669 841166 100805618 101267293 100266579 18097759 11439528 121216274 107937640 106402957 102590333 102631195 107822045 107770615
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