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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073669   E3 ubiquitin-protein ligase CHFR 
 zma-u.5   100274308   putative RING zinc finger domain superfamily protein 
 osa-u.5   4349917   uncharacterized LOC4349917 
 ath-u.5   AT1G47570   RING/U-box superfamily protein 
 gma-u.5   100805618   E3 ubiquitin-protein ligase CHFR-like 
 sly-u.5   101267293   uncharacterized LOC101267293 
 vvi-u.5   100266579   uncharacterized LOC100266579 
 ppo-u.5   18097759   uncharacterized LOC18097759 
 mtr-u.5   11439528   E3 ubiquitin-protein ligase CHFR 

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Top 50 coexpressed genes to 8073669 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073669 (sbi-r.1 coexpression data)

CoexMap"8073669"


sbiLOC8073669 | Entrez gene ID : 8073669    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007093 [list] [network] mitotic cell cycle checkpoint signaling  (32 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2038 genes)  IEA  
Protein XP_002449095.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for XP_002449095.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002449095.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073669

.
zma-u.5
for
100274308

.
osa-u.5
for
4349917

.
ath-u.5
for
AT1G47570

.
gma-u.5
for
100805618

.
sly-u.5
for
101267293

.
vvi-u.5
for
100266579

.
ppo-u.5
for
18097759

.
mtr-u.5
for
11439528

.


Ortholog ID: 11078
Species ath gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol AT1G47570 LOC100805618 LOC101267293 LOC4349917 LOC100274308 LOC100266579 LOC18097759 LOC11439528 LOC123091266 LOC123086719 LOC123447965 LOC121216274 LOC107937640 LOC106402957 LOC8073669 LOC102590333 LOC102631195 LOC100839249 LOC107822045 LOC107770615
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase CHFR-like uncharacterized LOC101267293 uncharacterized LOC4349917 putative RING zinc finger domain superfamily protein uncharacterized LOC100266579 uncharacterized LOC18097759 E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR-like E3 ubiquitin-protein ligase CHFR E3 ubiquitin-protein ligase CHFR uncharacterized LOC102631195 E3 ubiquitin-protein ligase CHFR uncharacterized LOC107822045 uncharacterized LOC107770615
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04145 Phagosome 3
bdi04148 Efferocytosis 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841166 100805618 101267293 4349917 100274308 100266579 18097759 11439528 123091266 123086719 123447965 121216274 107937640 106402957 8073669 102590333 102631195 100839249 107822045 107770615
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