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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103869174   protein SRG1 
 ath-u.5   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100820290   protein SRG1 
 gma-u.5   100785152   protein SRG1 
 vvi-u.5   100263198   protein SRG1 
 ppo-u.5   7475370   protein SRG1 
 mtr-u.5   25488175   protein SRG1 
 sly-u.5   101266862   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 osa-u.5   4326792   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 zma-u.5   100280091   uncharacterized LOC100280091 

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Top 50 coexpressed genes to 103869174 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103869174 (bra-r.6 coexpression data)

CoexMap"103869174"


braLOC103869174 | Entrez gene ID : 103869174    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00906 [list] [network] Carotenoid biosynthesis (54 genes)
GO BP
GO CC
GO MF
Protein XP_009145479.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  cysk 1,  nucl 1,  plas 1,  chlo_mito 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_009145479.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_009145479.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103869174
ath-u.5
for
LBO1
gma-u.5
for
100820290
gma-u.5
for
100785152
vvi-u.5
for
100263198
ppo-u.5
for
7475370
mtr-u.5
for
25488175
sly-u.5
for
101266862
osa-u.5
for
4326792
zma-u.5
for
100280091


Ortholog ID: 7589
Species bra bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103835211 LOC103869174 LOC125608795 LOC106446003 LBO1 LOC107916071 LOC107896707 LOC102625494 LOC100785152 LOC100820290 LOC100263198 LOC7475370 LOC25488175 LOC101266862 LOC102591514 LOC107818364 LOC107769042 LOC4326792 LOC100280091 LOC123080479 LOC123072238 LOC123440801 LOC8081307 LOC100844860
Function* protein SRG1 protein SRG1 protein SRG1-like protein SRG1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1-like protein LATERAL BRANCHING OXIDOREDUCTASE 1-like protein LATERAL BRANCHING OXIDOREDUCTASE 1 uncharacterized LOC100280091 protein SRG1 protein SRG1 protein SRG1 protein SRG1 probable 2-oxoglutarate-dependent dioxygenase ANS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00380 Tryptophan metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
gma00620 Pyruvate metabolism 3
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma01240 Biosynthesis of cofactors 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00910 Nitrogen metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103835211 103869174 125608795 106446003 821696 107916071 107896707 102625494 100785152 100820290 100263198 7475370 25488175 101266862 102591514 107818364 107769042 4326792 100280091 123080479 123072238 123440801 8081307 100844860
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