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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103869671   transcription factor bHLH3 
 bra-r.6   103860848   transcription factor bHLH3 
 bna-r.1   106446414   transcription factor bHLH3 
 bna-r.1   106440290   transcription factor bHLH3-like 
 bna-r.1   106391981   transcription factor bHLH3-like 
 ath-u.5   AT4G16430   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107924333   transcription factor bHLH3 
 ghi-r.1   107924232   transcription factor bHLH3 
 cit-r.1   102623941   transcription factor MTB3 
 gma-u.5   100819968   transcription factor MTB3 
 gma-u.5   100782107   transcription factor MTB3 
 vvi-u.5   100254474   transcription factor bHLH3 
 ppo-u.5   7479984   transcription factor bHLH3 
 ppo-u.5   7476894   transcription factor bHLH3 
 mtr-u.5   25499214   transcription factor bHLH3 
 sly-u.5   101259164   transcription factor MTB3 
 sot-r.1   102587940   transcription factor bHLH3 
 nta-r.1   107781062   transcription factor MTB3 
 nta-r.1   107825517   transcription factor MTB3 

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Top 50 coexpressed genes to 103869671 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103869671 (bra-r.6 coexpression data)

CoexMap"103869671"


braLOC103869671 | Entrez gene ID : 103869671    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta sbi hvu cre zma osa tae bdi
Paralog 2 3 1 2 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2595 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (641 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (727 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1840 genes)  IEA  
Protein XP_009146001.1 [sequence] [blastp]
XP_018510231.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_009146001.1)
nucl 8,  chlo 1  (predict for XP_018510231.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009146001.1)
other 8  (predict for XP_018510231.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103869671
bra-r.6
for
103860848
bna-r.1
for
106446414
bna-r.1
for
106440290
bna-r.1
for
106391981
ath-u.5
for
AT4G16430
ghi-r.1
for
107924333
ghi-r.1
for
107924232
cit-r.1
for
102623941
gma-u.5
for
100819968
gma-u.5
for
100782107
vvi-u.5
for
100254474
ppo-u.5
for
7479984
ppo-u.5
for
7476894
mtr-u.5
for
25499214
sly-u.5
for
101259164
sot-r.1
for
102587940
nta-r.1
for
107781062
nta-r.1
for
107825517


Ortholog ID: 12214
Species bra bra bna bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta
Symbol LOC103869671 LOC103860848 LOC106446414 LOC106440290 LOC125590025 AT4G16430 LOC107924333 LOC107924232 LOC102623941 LOC100819968 LOC100782107 LOC100254474 LOC7479984 LOC7476894 LOC25499214 LOC101259164 LOC102587940 LOC107781062 LOC107825517
Function* transcription factor bHLH3 transcription factor bHLH3 transcription factor bHLH3 transcription factor bHLH3-like transcription factor bHLH3-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH3 transcription factor bHLH3 transcription factor MTB3 transcription factor MTB3 transcription factor MTB3 transcription factor bHLH3 transcription factor bHLH3 transcription factor bHLH3 transcription factor bHLH3 transcription factor MTB3 transcription factor bHLH3 transcription factor MTB3 transcription factor MTB3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
sly04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 9
nta04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 8
nta04075 Plant hormone signal transduction 8
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103869671 103860848 106446414 106440290 125590025 827337 107924333 107924232 102623941 100819968 100782107 100254474 7479984 7476894 25499214 101259164 102587940 107781062 107825517
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