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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103870808   serine/threonine-protein phosphatase PP1 isozyme 9 
 bra-r.6   103833886   serine/threonine-protein phosphatase PP1 isozyme 6 
 bra-r.6   103838234   serine/threonine-protein phosphatase PP1 isozyme 3 
 bra-r.6   103854676   serine/threonine-protein phosphatase PP1 isozyme 9 
 bna-r.1   125575237   serine/threonine-protein phosphatase PP1-like 
 bna-r.1   111203405   serine/threonine-protein phosphatase PP1 isozyme 9 
 bna-r.1   125600798   serine/threonine-protein phosphatase PP1 isozyme 9-like 
 ath-u.5   TOPP6   type one serine/threonine protein phosphatase 6 
 ath-u.5   TOPP3   type one serine/threonine protein phosphatase 3 
 ath-u.5   TOPP2   type one serine/threonine protein phosphatase 2 
 ghi-r.1   107949500   serine/threonine-protein phosphatase PP1 
 ghi-r.1   107940543   serine/threonine-protein phosphatase PP1 isozyme 2 
 ghi-r.1   107936665   serine/threonine-protein phosphatase PP1 isozyme 4 
 cit-r.1   102612516   serine/threonine-protein phosphatase PP1 isozyme 2 
 cit-r.1   102611078   serine/threonine-protein phosphatase PP1 
 cit-r.1   102613210   serine/threonine-protein phosphatase PP1-like 
 gma-u.5   100807069   serine/threonine-protein phosphatase PP1 isozyme 4-like 
 gma-u.5   100808597   serine/threonine-protein phosphatase PP1 
 gma-u.5   100811593   serine/threonine-protein phosphatase PP1 isozyme 4-like 
 vvi-u.5   100250219   serine/threonine-protein phosphatase PP1 
 vvi-u.5   100259840   serine/threonine-protein phosphatase PP1 isozyme 4 
 ppo-u.5   7465940   serine/threonine-protein phosphatase PP1 isozyme 2 
 ppo-u.5   7465083   serine/threonine-protein phosphatase PP1 isozyme 2 
 ppo-u.5   7487983   serine/threonine-protein phosphatase PP1 isozyme 4 
 mtr-u.5   11431740   serine/threonine-protein phosphatase PP1 
 mtr-u.5   25502117   serine/threonine-protein phosphatase PP1 
 mtr-u.5   11432243   serine/threonine-protein phosphatase PP1 
 sly-u.5   101258308   serine/threonine-protein phosphatase PP1 
 sly-u.5   101254698   serine/threonine-protein phosphatase PP1 isozyme 3 
 sly-u.5   101251329   serine/threonine-protein phosphatase PP1 
 sot-r.1   102594341   serine/threonine-protein phosphatase PP1-like 
 sot-r.1   102587690   serine/threonine-protein phosphatase PP1-like 
 sot-r.1   102590224   serine/threonine-protein phosphatase PP1-like 
 nta-r.1   107822639   serine/threonine-protein phosphatase PP1 
 nta-r.1   107770342   serine/threonine-protein phosphatase PP1 isozyme 2 
 nta-r.1   107759017   serine/threonine-protein phosphatase PP1 isozyme 3-like 
 osa-u.5   4340228   serine/threonine-protein phosphatase PP1 
 osa-u.5   4326473   serine/threonine-protein phosphatase PP1 
 zma-u.5   100283013   uncharacterized LOC100283013 
 zma-u.5   100272981   Serine/threonine-protein phosphatase PP1 isozyme 2 
 zma-u.5   100282306   serine/threonine-protein phosphatase PP1 
 tae-r.2   123113707   serine/threonine-protein phosphatase PP1 
 tae-r.2   123069823   serine/threonine-protein phosphatase PP1 
 tae-r.2   123097940   serine/threonine-protein phosphatase PP1 
 hvu-r.1   123449051   serine/threonine-protein phosphatase PP1 
 hvu-r.1   123443630   serine/threonine-protein phosphatase PP1-like 
 hvu-r.1   123442731   serine/threonine-protein phosphatase alpha-3 isoform-like 
 sbi-r.1   8069536   serine/threonine-protein phosphatase PP1 
 sbi-r.1   8075330   serine/threonine-protein phosphatase PP1 
 sbi-r.1   8084952   serine/threonine-protein phosphatase PP1 
 bdi-r.1   100822417   serine/threonine-protein phosphatase PP1 
 bdi-r.1   100827362   serine/threonine-protein phosphatase alpha-3 isoform 
 bdi-r.1   100829796   serine/threonine-protein phosphatase PP1 
 cre-r.1   CHLRE_06g292550v5   uncharacterized protein 

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Top 50 coexpressed genes to 103870808 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103870808 (bra-r.6 coexpression data)

CoexMap"103870808"


braLOC103870808 | Entrez gene ID : 103870808    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 2 3 3 3 3 3 2 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03015 [list] [network] mRNA surveillance pathway (205 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (174 genes)  IEA  
Protein XP_009147219.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  plas 1,  E.R. 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_009147219.2)
Subcellular
localization
TargetP
other 9  (predict for XP_009147219.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103870808
bra-r.6
for
103833886
bra-r.6
for
103838234
bra-r.6
for
103854676
bna-r.1
for
125575237
bna-r.1
for
111203405
bna-r.1
for
125600798
ath-u.5
for
TOPP6
ath-u.5
for
TOPP3
ath-u.5
for
TOPP2
ghi-r.1
for
107949500
ghi-r.1
for
107940543
ghi-r.1
for
107936665
cit-r.1
for
102612516
cit-r.1
for
102611078
cit-r.1
for
102613210
gma-u.5
for
100807069
gma-u.5
for
100808597
gma-u.5
for
100811593
vvi-u.5
for
100250219
vvi-u.5
for
100259840
ppo-u.5
for
7465940
ppo-u.5
for
7465083
ppo-u.5
for
7487983
mtr-u.5
for
11431740
mtr-u.5
for
25502117
mtr-u.5
for
11432243
sly-u.5
for
101258308
sly-u.5
for
101254698
sly-u.5
for
101251329
sot-r.1
for
102594341
sot-r.1
for
102587690
sot-r.1
for
102590224
nta-r.1
for
107822639
nta-r.1
for
107770342
nta-r.1
for
107759017
osa-u.5
for
4340228
osa-u.5
for
4326473
zma-u.5
for
100283013
zma-u.5
for
100272981
zma-u.5
for
100282306
tae-r.2
for
123113707
tae-r.2
for
123069823
tae-r.2
for
123097940
hvu-r.1
for
123449051
hvu-r.1
for
123443630
hvu-r.1
for
123442731
sbi-r.1
for
8069536
sbi-r.1
for
8075330
sbi-r.1
for
8084952
bdi-r.1
for
100822417
bdi-r.1
for
100827362
bdi-r.1
for
100829796
cre-r.1
for
CHLRE_06g292550v5


Ortholog ID: 188
Species bra bra bra bna bna bna ath ath ath ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC103827974 LOC103873291 LOC103856650 LOC106366228 LOC106387225 LOC106388742 TOPP6 TOPP5 TOPP9 LOC107906581 LOC107952129 LOC102612516 LOC102611078 LOC102610810 LOC100811593 LOC100783178 LOC100780047 LOC100250219 LOC100259840 LOC100258649 LOC7468609 LOC7458113 LOC11431740 LOC11432243 LOC11425683 LOC101254698 LOC101251329 LOC101260053 LOC102590224 LOC102590757 LOC102602508 LOC107822639 LOC107828780 LOC107801901 LOC4340228 LOC4326473 LOC4332369 LOC542269 LOC103635487 LOC100284227 LOC123068691 LOC123180557 LOC123407142 LOC123399686 LOC8075330 LOC110434642 LOC100829796 LOC100841528 LOC100821631 CHLRE_06g292550v5
Function* serine/threonine-protein phosphatase PP1 isozyme 7 serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 isozyme 6-like serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 isozyme 2 type one serine/threonine protein phosphatase 6 type one serine/threonine protein phosphatase 5 Calcineurin-like metallo-phosphoesterase superfamily protein serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 4 serine/threonine-protein phosphatase PP1 isozyme 4-like serine/threonine-protein phosphatase PP1-like serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 4 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 1 serine/threonine-protein phosphatase PP1 isozyme 4 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 3 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 1 serine/threonine-protein phosphatase PP1-like serine/threonine-protein phosphatase PP1 isozyme 3 serine/threonine-protein phosphatase PP1 isozyme 2 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 isozyme 3 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1-like ser/thr protein phosphatase 1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase alpha-3 isoform serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1-like serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 serine/threonine-protein phosphatase PP1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 4
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 5
ath04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma04142 Lysosome 2
gma03013 Nucleocytoplasmic transport 2
gma00500 Starch and sucrose metabolism 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 9
vvi01212 Fatty acid metabolism 8
vvi01240 Biosynthesis of cofactors 7
vvi00780 Biotin metabolism 6
vvi01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi04120 Ubiquitin mediated proteolysis 3
vvi04382 Cornified envelope formation 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00561 Glycerolipid metabolism 2
ppo00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 4
sly01200 Carbon metabolism 4
sly03040 Spliceosome 4
sly00785 Lipoic acid metabolism 3
sly01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03013 Nucleocytoplasmic transport 3
sly03040 Spliceosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma03015 mRNA surveillance pathway 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04075 Plant hormone signal transduction 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03015 mRNA surveillance pathway 4
cre04382 Cornified envelope formation 3
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103827974 103873291 103856650 106366228 106387225 106388742 834356 823835 819724 107906581 107952129 102612516 102611078 102610810 100811593 100783178 100780047 100250219 100259840 100258649 7468609 7458113 11431740 11432243 11425683 101254698 101251329 101260053 102590224 102590757 102602508 107822639 107828780 107801901 4340228 4326473 4332369 542269 103635487 100284227 123068691 123180557 123407142 123399686 8075330 110434642 100829796 100841528 100821631 5727122
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