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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103870949   cystathionine gamma-synthase 1, chloroplastic 
 ath-u.5   MTO1   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 gma-u.5   CGS1   cystathionine gamma-synthase 1, chloroplastic 
 gma-u.5   CGS2   cystathionine-gamma-synthase 
 vvi-u.5   100267880   cystathionine gamma-synthase 1, chloroplastic 
 ppo-u.5   7482488   cystathionine gamma-synthase 1, chloroplastic 
 mtr-u.5   11427680   cystathionine gamma-synthase 1, chloroplastic 
 mtr-u.5   11406997   cystathionine gamma-synthase 1, chloroplastic 
 sly-u.5   CGS   cystathionine gamma synthase 
 zma-u.5   541650   cystathionine gamma-synthase 1 

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Top 50 coexpressed genes to 103870949 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103870949 (bra-r.6 coexpression data)

CoexMap"103870949"


braLOC103870949 | Entrez gene ID : 103870949    
Species bra ath gma vvi ppo mtr sly zma bdi hvu cit bna sbi ghi osa sot nta cre tae
Paralog 1 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp00270 [list] [network] Cysteine and methionine metabolism (193 genes)
GO BP
GO:0019346 [list] [network] transsulfuration  (9 genes)  IEA  
GO:0009086 [list] [network] methionine biosynthetic process  (30 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (845 genes)  IEA  
GO MF
GO:0003962 [list] [network] cystathionine gamma-synthase activity  (3 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (147 genes)  IEA  
Protein XP_009147397.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009147397.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_009147397.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103870949
ath-u.5
for
MTO1
gma-u.5
for
CGS1
gma-u.5
for
CGS2
vvi-u.5
for
100267880
ppo-u.5
for
7482488
mtr-u.5
for
11427680
mtr-u.5
for
11406997
sly-u.5
for
CGS
zma-u.5
for
541650


Ortholog ID: 2149
Species bra bna ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot sot nta nta zma zma hvu sbi sbi bdi cre
Symbol LOC103870949 LOC106453252 MTO1 LOC107955507 LOC107943482 LOC102621879 CGS2 CGS1 LOC100267880 LOC7482488 LOC11427680 LOC11406997 CGS LOC102601571 CGS2 LOC107822634 LOC107774020 LOC100191523 LOC541650 LOC123448483 LOC8080479 LOC8059635 LOC100837599 CHLRE_03g144627v5
Function* cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic Pyridoxal phosphate (PLP)-dependent transferases superfamily protein cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine-gamma-synthase cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic cystathionine gamma synthase cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase cystathionine gamma-synthase 1, chloroplastic-like cystathionine gamma-synthase 1, chloroplastic-like uncharacterized LOC100191523 cystathionine gamma-synthase 1 cystathionine gamma-synthase 1, chloroplastic cystathionine gamma-synthase 1, chloroplastic probable cystathionine gamma-synthase 2 cystathionine gamma-synthase 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 6
bra01230 Biosynthesis of amino acids 6
bra00966 Glucosinolate biosynthesis 6
bra01210 2-Oxocarboxylic acid metabolism 6
bra00920 Sulfur metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 11
ath00966 Glucosinolate biosynthesis 10
ath01230 Biosynthesis of amino acids 7
ath00290 Valine, leucine and isoleucine biosynthesis 6
ath00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit01230 Biosynthesis of amino acids 3
cit00260 Glycine, serine and threonine metabolism 2
cit00270 Cysteine and methionine metabolism 2
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00900 Terpenoid backbone biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
gma00220 Arginine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00920 Sulfur metabolism 5
gma01320 Sulfur cycle 5
gma00900 Terpenoid backbone biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi01210 2-Oxocarboxylic acid metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00190 Oxidative phosphorylation 2
ppo04814 Motor proteins 2
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 10
mtr00270 Cysteine and methionine metabolism 6
mtr00670 One carbon pool by folate 5
mtr01240 Biosynthesis of cofactors 4
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 7
sly00010 Glycolysis / Gluconeogenesis 5
sly00620 Pyruvate metabolism 4
sly01240 Biosynthesis of cofactors 4
sly00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 4
sot00020 Citrate cycle (TCA cycle) 4
sot00620 Pyruvate metabolism 4
sot00785 Lipoic acid metabolism 4
sot01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00190 Oxidative phosphorylation 2
sot04142 Lysosome 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
nta04626 Plant-pathogen interaction 4
nta00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 5
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu03010 Ribosome 3
hvu00710 Carbon fixation by Calvin cycle 2
hvu01230 Biosynthesis of amino acids 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103870949 106453252 821292 107955507 107943482 102621879 548023 100794584 100267880 7482488 11427680 11406997 543920 102601571 102577796 107822634 107774020 100191523 541650 123448483 8080479 8059635 100837599 5721297
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