ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103872328	TSET complex member tstD
ath-u.5	AT1G15370	SNARE-like superfamily protein
gma-u.5	100306313	uncharacterized LOC100306313
gma-u.5	100781055	TSET complex member tstD
gma-u.5	100305755	uncharacterized LOC100305755
vvi-u.5	100245686	uncharacterized LOC100245686
ppo-u.5	7475120	uncharacterized LOC7475120
mtr-u.5	11433582	TSET complex member tstD
sly-u.5	101263822	uncharacterized LOC101263822
sly-u.5	101247418	uncharacterized LOC101247418
osa-u.5	4334836	uncharacterized LOC4334836
zma-u.5	100193319	uncharacterized LOC100193319

functional annotation

KEGG

GO BP

GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	(48 genes)	IEA
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport	(53 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(422 genes)	IEA

GO CC

GO:0030126 [list] [network] COPI vesicle coat

(31 genes)

IEA

GO MF

Protein

XP_009148926.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, extr 2, cyto_E.R. 2, chlo 1, golg 1

(predict for XP_009148926.1)

Subcellular
localization
TargetP

other 3

(predict for XP_009148926.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103872328	ath-u.5 for AT1G15370	gma-u.5 for 100306313	gma-u.5 for 100781055	gma-u.5 for 100305755	vvi-u.5 for 100245686	ppo-u.5 for 7475120	mtr-u.5 for 11433582	sly-u.5 for 101263822	sly-u.5 for 101247418	osa-u.5 for 4334836	zma-u.5 for 100193319

Ortholog ID: 4816

Species

bra

bna

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

TSET complex member tstD

SNARE-like superfamily protein

uncharacterized LOC107918901

uncharacterized LOC102627195

uncharacterized LOC100305755

uncharacterized LOC100306313

uncharacterized LOC100245686

uncharacterized LOC7475120

TSET complex member tstD

uncharacterized LOC101247418

uncharacterized LOC102596407

uncharacterized LOC107772431

uncharacterized LOC4334836

uncharacterized LOC100193319

uncharacterized LOC100037555

uncharacterized LOC123397456

uncharacterized LOC8059257

pentatricopeptide repeat-containing protein At5g46580, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra04141	Protein processing in endoplasmic reticulum	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	3
ath04130	SNARE interactions in vesicular transport	2
ath04141	Protein processing in endoplasmic reticulum	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00020	Citrate cycle (TCA cycle)	4
gma01200	Carbon metabolism	4
gma01210	2-Oxocarboxylic acid metabolism	4
gma04144	Endocytosis	4
gma00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00020	Citrate cycle (TCA cycle)	4
gma01200	Carbon metabolism	4
gma01210	2-Oxocarboxylic acid metabolism	4
gma00785	Lipoic acid metabolism	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	6
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

103872328

103842900

106452234

106412108

838106

107918901

102627195

100305755

100306313

100245686

7475120

11433582

101247418

102596407

107772431

4334836

100193319

100037555

123397456

8059257

100844620

5728682

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103872328 (bra-r.6 coexpression data)

Top 50 enrichment test to 103872328 (bra-r.6 coexpression data)


Species	bra	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	3	1	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103872328 (bra-r.6 coexpression data)

Top 50 enrichment test to 103872328 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**