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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103875274   uncharacterized LOC103875274 
 bna-r.1   106408140   uncharacterized LOC106408140 
 bna-r.1   106349315   uncharacterized LOC106349315 
 ath-u.5   AT3G26750   HECT-like ubiquitin-conjugating enzyme (E2)-binding protein 
 ghi-r.1   107913050   uncharacterized LOC107913050 
 ghi-r.1   107901191   uncharacterized LOC107901191 
 cit-r.1   102618002   uncharacterized LOC102618002 
 gma-u.5   100791241   uncharacterized LOC100791241 
 vvi-u.5   100260906   uncharacterized LOC100260906 
 ppo-u.5   7480145   uncharacterized LOC7480145 
 mtr-u.5   11409698   uncharacterized LOC11409698 
 sly-u.5   101246799   uncharacterized LOC101246799 
 sot-r.1   102582264   uncharacterized LOC102582264 
 nta-r.1   107771164   uncharacterized LOC107771164 
 nta-r.1   107825908   uncharacterized LOC107825908 
 osa-u.5   4328192   uncharacterized LOC4328192 
 zma-u.5   100381864   uncharacterized LOC100381864 
 zma-u.5   103656039   uncharacterized LOC103656039 
 tae-r.2   123143594   uncharacterized LOC123143594 
 tae-r.2   123136083   uncharacterized LOC123136083 
 tae-r.2   123132057   uncharacterized LOC123132057 
 hvu-r.1   123401366   uncharacterized LOC123401366 
 sbi-r.1   8057514   uncharacterized LOC8057514 
 bdi-r.1   100834319   uncharacterized LOC100834319 

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Top 50 coexpressed genes to 103875274 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103875274 (bra-r.6 coexpression data)

CoexMap"103875274"


braLOC103875274 | Entrez gene ID : 103875274    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051865 [list] [network] protein autoubiquitination  (1 genes)  IEA  
GO:0006513 [list] [network] protein monoubiquitination  (6 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (133 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (232 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (233 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1543 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
GO:0030332 [list] [network] cyclin binding  (9 genes)  IEA  
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (63 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (295 genes)  IEA  
Protein XP_009152023.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 2,  mito 2,  chlo 1  (predict for XP_009152023.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for XP_009152023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103875274
bna-r.1
for
106408140
bna-r.1
for
106349315
ath-u.5
for
AT3G26750
ghi-r.1
for
107913050
ghi-r.1
for
107901191
cit-r.1
for
102618002
gma-u.5
for
100791241
vvi-u.5
for
100260906
ppo-u.5
for
7480145
mtr-u.5
for
11409698
sly-u.5
for
101246799
sot-r.1
for
102582264
nta-r.1
for
107771164
nta-r.1
for
107825908
osa-u.5
for
4328192
zma-u.5
for
100381864
zma-u.5
for
103656039
tae-r.2
for
123143594
tae-r.2
for
123136083
tae-r.2
for
123132057
hvu-r.1
for
123401366
sbi-r.1
for
8057514
bdi-r.1
for
100834319


Ortholog ID: 10797
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103875274 LOC106408140 LOC106349315 AT3G26750 LOC107913050 LOC107901191 LOC102618002 LOC100791241 LOC100260906 LOC7480145 LOC11409698 LOC101246799 LOC102582264 LOC107771164 LOC107825908 LOC4328192 LOC100381864 LOC103656039 LOC123143594 LOC123136083 LOC123132057 LOC123401366 LOC8057514 LOC100834319
Function* uncharacterized LOC103875274 uncharacterized LOC106408140 uncharacterized LOC106349315 HECT-like ubiquitin-conjugating enzyme (E2)-binding protein uncharacterized LOC107913050 uncharacterized LOC107901191 uncharacterized LOC102618002 uncharacterized LOC100791241 uncharacterized LOC100260906 uncharacterized LOC7480145 uncharacterized LOC11409698 uncharacterized LOC101246799 uncharacterized LOC102582264 uncharacterized LOC107771164 uncharacterized LOC107825908 uncharacterized LOC4328192 uncharacterized LOC100381864 uncharacterized LOC103656039 uncharacterized LOC123143594 uncharacterized LOC123136083 uncharacterized LOC123132057 uncharacterized LOC123401366 uncharacterized LOC8057514 uncharacterized LOC100834319
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit03013 Nucleocytoplasmic transport 4
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03040 Spliceosome 3
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03040 Spliceosome 5
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 3
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103875274 106408140 106349315 822288 107913050 107901191 102618002 100791241 100260906 7480145 11409698 101246799 102582264 107771164 107825908 4328192 100381864 103656039 123143594 123136083 123132057 123401366 8057514 100834319
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