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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480145   uncharacterized LOC7480145 
 ppo-r.4   7480145   uncharacterized LOC7480145 
 gma-u.5   100791241   uncharacterized LOC100791241 
 mtr-u.5   11409698   uncharacterized LOC11409698 
 ath-u.5   AT3G26750   HECT-like ubiquitin-conjugating enzyme (E2)-binding protein 
 vvi-u.5   100260906   uncharacterized LOC100260906 
 sly-u.5   101246799   uncharacterized LOC101246799 
 osa-u.5   4328192   uncharacterized LOC4328192 
 zma-u.5   103656039   uncharacterized LOC103656039 
 zma-u.5   100381864   uncharacterized LOC100381864 

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Top 50 coexpressed genes to 7480145 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480145 (ppo-u.5 coexpression data)

CoexMap"7480145"


ppoLOC7480145 | Entrez gene ID : 7480145    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051865 [list] [network] protein autoubiquitination  (1 genes)  IEA  
GO:0006513 [list] [network] protein monoubiquitination  (5 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (88 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (182 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (189 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0030332 [list] [network] cyclin binding  (7 genes)  IEA  
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (31 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
Protein XP_024461155.2 [sequence] [blastp]
XP_052310430.1 [sequence] [blastp]
XP_052310431.1 [sequence] [blastp]
XP_052310432.1 [sequence] [blastp]
XP_052310433.1 [sequence] [blastp]
XP_052310434.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cyto_nucl 2,  cyto_mito 1  (predict for XP_024461155.2)
nucl 6,  mito 2,  cysk 1  (predict for XP_052310430.1)
nucl 6,  mito 2,  cysk 1  (predict for XP_052310431.1)
nucl 6,  mito 2,  cyto_mito 1,  cysk 1  (predict for XP_052310432.1)
nucl 6,  mito 2,  cyto_mito 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_052310433.1)
nucl 6,  mito 1,  cysk 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for XP_052310434.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for XP_024461155.2)
chlo 6,  mito 5  (predict for XP_052310430.1)
chlo 6,  mito 5  (predict for XP_052310431.1)
chlo 6,  mito 5  (predict for XP_052310432.1)
chlo 6,  mito 5  (predict for XP_052310433.1)
mito 7,  chlo 4  (predict for XP_052310434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480145

.
ppo-r.4
for
7480145

.
gma-u.5
for
100791241

.
mtr-u.5
for
11409698

.
ath-u.5
for
AT3G26750

.
vvi-u.5
for
100260906

.
sly-u.5
for
101246799

.
osa-u.5
for
4328192

.
zma-u.5
for
103656039

.
zma-u.5
for
100381864

.


Ortholog ID: 10797
Species ath gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G26750 LOC100791241 LOC101246799 LOC4328192 LOC103656039 LOC100381864 LOC103875274 LOC100260906 LOC7480145 LOC11409698 LOC123136083 LOC123132057 LOC123401366 LOC107901191 LOC107913050 LOC106349315 LOC106408140 LOC8057514 LOC102582264 LOC102618002 LOC100834319 LOC107771164 LOC107825908
Function* HECT-like ubiquitin-conjugating enzyme (E2)-binding protein uncharacterized LOC100791241 uncharacterized LOC101246799 uncharacterized LOC4328192 uncharacterized LOC103656039 uncharacterized LOC100381864 uncharacterized LOC103875274 uncharacterized LOC100260906 uncharacterized LOC7480145 uncharacterized LOC11409698 uncharacterized LOC123136083 uncharacterized LOC123132057 uncharacterized LOC123401366 uncharacterized LOC107901191 uncharacterized LOC107913050 uncharacterized LOC106349315 uncharacterized LOC106408140 uncharacterized LOC8057514 uncharacterized LOC102582264 uncharacterized LOC102618002 uncharacterized LOC100834319 uncharacterized LOC107771164 uncharacterized LOC107825908
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi04626 Plant-pathogen interaction 3
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit03013 Nucleocytoplasmic transport 4
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03040 Spliceosome 3
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03040 Spliceosome 5
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822288 100791241 101246799 4328192 103656039 100381864 103875274 100260906 7480145 11409698 123136083 123132057 123401366 107901191 107913050 106349315 106408140 8057514 102582264 102618002 100834319 107771164 107825908
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