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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106345887   protein LPA2 
 ath-u.5   LPA2   low psii accumulation2 
 gma-u.5   100777895   uncharacterized LOC100777895 
 vvi-u.5   100261162   protein LPA2 
 ppo-u.5   7476755   protein LPA2 
 mtr-u.5   25491831   protein LOW PSII ACCUMULATION 2, chloroplastic 
 sly-u.5   101250094   protein LPA2 
 osa-u.5   4328146   protein LPA2 
 zma-u.5   100278883   Protein LOW PSII ACCUMULATION 2 chloroplastic 

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Top 50 coexpressed genes to 106345887 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106345887 (bna-r.1 coexpression data)

CoexMap"106345887"


bnaLOC106345887 | Entrez gene ID : 106345887    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
Protein XP_013640548.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013640548.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_013640548.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106345887

.
ath-u.5
for
LPA2

.
gma-u.5
for
100777895

.
vvi-u.5
for
100261162

.
ppo-u.5
for
7476755

.
mtr-u.5
for
25491831

.
sly-u.5
for
101250094

.
osa-u.5
for
4328146

.
zma-u.5
for
100278883

.


Ortholog ID: 10567
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol LPA2 LOC100777895 LOC101250094 LOC4328146 LOC100278883 LOC103857177 LOC100261162 LOC7476755 LOC25491831 LOC123143479 LOC123131960 LOC123401850 LOC107953667 LOC107933132 LOC106345887 LOC106387933 CHLRE_02g105650v5 LOC8061363 LOC8068278 LOC102583711 LOC102619762 LOC100826673 LOC107815532 LOC107811987
Function* low psii accumulation2 uncharacterized LOC100777895 protein LPA2 protein LPA2 Protein LOW PSII ACCUMULATION 2 chloroplastic protein LOW PSII ACCUMULATION 2, chloroplastic protein LPA2 protein LPA2 protein LOW PSII ACCUMULATION 2, chloroplastic protein LPA2 protein LPA2 protein LPA2 protein LOW PSII ACCUMULATION 2, chloroplastic protein LOW PSII ACCUMULATION 2, chloroplastic protein LPA2 protein LPA2 uncharacterized protein protein LOW PSII ACCUMULATION 2, chloroplastic protein LOW PSII ACCUMULATION 2, chloroplastic protein LOW PSII ACCUMULATION 2, chloroplastic protein LPA2 protein LOW PSII ACCUMULATION 2, chloroplastic protein LPA2 protein LPA2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 6
tae00010 Glycolysis / Gluconeogenesis 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00030 Pentose phosphate pathway 2
bna00040 Pentose and glucuronate interconversions 2
bna00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00030 Pentose phosphate pathway 2
bna00040 Pentose and glucuronate interconversions 2
bna00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 5
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 3771487 100777895 101250094 4328146 100278883 103857177 100261162 7476755 25491831 123143479 123131960 123401850 107953667 107933132 106345887 106387933 5725305 8061363 8068278 102583711 102619762 100826673 107815532 107811987
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