ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106346333	putative axial regulator YABBY 2
bna-r.1	106360279	putative axial regulator YABBY 2
bna-r.1	106377031	putative axial regulator YABBY 2
bna-r.1	106383131	putative axial regulator YABBY 2
bra-r.6	103871588	putative axial regulator YABBY 2
bra-r.6	103858348	axial regulator YABBY 5
ath-u.5	YAB5	plant-specific transcription factor YABBY family protein
ath-u.5	YAB2	Plant-specific transcription factor YABBY family protein
ghi-r.1	107901565	putative axial regulator YABBY 2
ghi-r.1	107897255	axial regulator YABBY 5
ghi-r.1	107907328	axial regulator YABBY 5
cit-r.1	102611194	axial regulator YABBY 5
cit-r.1	102624359	putative axial regulator YABBY 2
gma-u.5	100785458	protein YABBY 12
gma-u.5	100500091	protein YABBY 11
gma-u.5	100500026	protein YABBY 9
vvi-u.5	100256505	putative axial regulator YABBY 2
vvi-u.5	100267536	axial regulator YABBY 5
vvi-u.5	100254328	axial regulator YABBY 5
ppo-u.5	7472992	axial regulator YABBY 5
ppo-u.5	7469930	putative axial regulator YABBY 2
ppo-u.5	7470091	axial regulator YABBY 5
mtr-u.5	11416031	putative axial regulator YABBY 2
mtr-u.5	11446936	putative axial regulator YABBY 2
sly-u.5	YABBY2	YABBY transcription factor
sly-u.5	YABBY5a	axial regulator YABBY5a
sly-u.5	YABBY2a	putative axial regulator YABBY 2a
sot-r.1	102578472	axial regulator YABBY 5-like
sot-r.1	102605344	putative axial regulator YABBY 2
sot-r.1	102581691	putative axial regulator YABBY 2
nta-r.1	107771844	axial regulator YABBY 5
nta-r.1	107763706	axial regulator YABBY 5
nta-r.1	107808962	axial regulator YABBY 5
osa-u.5	4333584	protein YABBY 2-like
osa-u.5	4342449	protein YABBY 1-like
osa-u.5	4352818	protein YABBY 6-like
zma-u.5	100283014	uncharacterized LOC100283014
zma-u.5	100193531	uncharacterized LOC100193531
zma-u.5	100272921	uncharacterized LOC100272921
tae-r.2	123104886	protein YABBY 2
hvu-r.1	123452083	protein YABBY 2-like
sbi-r.1	8071489	protein YABBY 6
bdi-r.1	100826382	protein YABBY 6
bdi-r.1	100827245	protein YABBY 2
bdi-r.1	100837815	protein YABBY 1

Top 50 coexpressed genes to 106346333 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106346333 (bna-r.1 coexpression data)

CoexMap"106346333"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045165 [list] [network] cell fate commitment	(84 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(716 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

Protein

XP_013641083.1 [sequence] [blastp]
XP_013641084.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, E.R. 2, nucl 1, cyto 1, cyto_nucl 1, E.R._vacu 1	(predict for XP_013641083.1)
extr 3, E.R. 2, nucl 1, cyto 1, cyto_nucl 1, E.R._vacu 1	(predict for XP_013641084.1)

Subcellular
localization
TargetP

other 3	(predict for XP_013641083.1)
other 3	(predict for XP_013641084.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106346333	bna-r.1 for 106360279	bna-r.1 for 106377031	bna-r.1 for 106383131	bra-r.6 for 103871588	bra-r.6 for 103858348	ath-u.5 for YAB5	ath-u.5 for YAB2	ghi-r.1 for 107901565	ghi-r.1 for 107897255	ghi-r.1 for 107907328	cit-r.1 for 102611194	cit-r.1 for 102624359	gma-u.5 for 100785458	gma-u.5 for 100500091	gma-u.5 for 100500026	vvi-u.5 for 100256505	vvi-u.5 for 100267536	vvi-u.5 for 100254328	ppo-u.5 for 7472992	ppo-u.5 for 7469930	ppo-u.5 for 7470091	mtr-u.5 for 11416031	mtr-u.5 for 11446936	sly-u.5 for YABBY2	sly-u.5 for YABBY5a	sly-u.5 for YABBY2a	sot-r.1 for 102578472	sot-r.1 for 102605344	sot-r.1 for 102581691	nta-r.1 for 107771844	nta-r.1 for 107763706	nta-r.1 for 107808962	osa-u.5 for 4333584	osa-u.5 for 4342449	osa-u.5 for 4352818	zma-u.5 for 100283014	zma-u.5 for 100193531	zma-u.5 for 100272921	tae-r.2 for 123104886	hvu-r.1 for 123452083	sbi-r.1 for 8071489	bdi-r.1 for 100826382	bdi-r.1 for 100827245	bdi-r.1 for 100837815

Ortholog

Ortholog ID: 1260

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

YAB5

YAB2

YABBY2

YABBY5a

YABBY5b

Function^*