ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102581691	putative axial regulator YABBY 2
sot-r.1	102605344	putative axial regulator YABBY 2
sot-r.1	102578472	axial regulator YABBY 5-like
sot-r.1	102597616	axial regulator YABBY 5-like
sly-u.5	YABBY5b	axial regulator YABBY5b
sly-u.5	YABBY5a	axial regulator YABBY5a
sly-u.5	YABBY2	YABBY transcription factor
nta-r.1	107771844	axial regulator YABBY 5
nta-r.1	107763706	axial regulator YABBY 5
nta-r.1	107808962	axial regulator YABBY 5
ath-u.5	YAB5	plant-specific transcription factor YABBY family protein
ath-u.5	YAB2	Plant-specific transcription factor YABBY family protein
gma-u.5	100785458	protein YABBY 12
gma-u.5	100500091	protein YABBY 11
gma-u.5	100500026	protein YABBY 9
bra-r.6	103871588	putative axial regulator YABBY 2
bra-r.6	103858348	axial regulator YABBY 5
vvi-u.5	100256505	putative axial regulator YABBY 2
vvi-u.5	100267536	axial regulator YABBY 5
vvi-u.5	100254328	axial regulator YABBY 5
ppo-u.5	7472992	axial regulator YABBY 5
ppo-u.5	7469930	putative axial regulator YABBY 2
ppo-u.5	7470091	axial regulator YABBY 5
mtr-u.5	11416031	putative axial regulator YABBY 2
mtr-u.5	11446936	putative axial regulator YABBY 2
ghi-r.1	107889233	putative axial regulator YABBY 2
ghi-r.1	107897255	axial regulator YABBY 5
ghi-r.1	107901565	putative axial regulator YABBY 2
bna-r.1	106360279	putative axial regulator YABBY 2
bna-r.1	106388387	axial regulator YABBY 5
bna-r.1	106346333	putative axial regulator YABBY 2
cit-r.1	102624359	putative axial regulator YABBY 2
cit-r.1	102611194	axial regulator YABBY 5
osa-u.5	4342449	protein YABBY 1-like
osa-u.5	4333584	protein YABBY 2-like
osa-u.5	4352818	protein YABBY 6-like
zma-u.5	118471992	protein YABBY 2-like
zma-u.5	100283014	uncharacterized LOC100283014
zma-u.5	103626034	protein YABBY 2
tae-r.2	123104886	protein YABBY 2
tae-r.2	123122693	protein YABBY 2
hvu-r.1	123452083	protein YABBY 2-like
sbi-r.1	8071489	protein YABBY 6
bdi-r.1	100837815	protein YABBY 1
bdi-r.1	100826382	protein YABBY 6
bdi-r.1	100827245	protein YABBY 2

Top 50 coexpressed genes to 102581691 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102581691 (sot-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

putative axial regulator YABBY 2

KEGG

GO BP

GO:0010158 [list] [network] abaxial cell fate specification	(11 genes)	IEA
GO:0045165 [list] [network] cell fate commitment	(19 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(205 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2556 genes)

IEA

GO MF

Protein

XP_006361110.1 [sequence] [blastp]
XP_015170608.1 [sequence] [blastp]
XP_015170609.1 [sequence] [blastp]
XP_015170610.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_006361110.1)
nucl 8, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for XP_015170608.1)
nucl 6, chlo 1, cyto 1, mito 1, extr 1	(predict for XP_015170609.1)
nucl 6, chlo 1, cyto 1, mito 1, extr 1	(predict for XP_015170610.1)

Subcellular
localization
TargetP

other 6	(predict for XP_006361110.1)
other 6	(predict for XP_015170608.1)
scret 2	(predict for XP_015170609.1)
scret 2	(predict for XP_015170610.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102581691	sot-r.1 for 102605344	sot-r.1 for 102578472	sot-r.1 for 102597616	sly-u.5 for YABBY5b	sly-u.5 for YABBY5a	sly-u.5 for YABBY2	nta-r.1 for 107771844	nta-r.1 for 107763706	nta-r.1 for 107808962	ath-u.5 for YAB5	ath-u.5 for YAB2	gma-u.5 for 100785458	gma-u.5 for 100500091	gma-u.5 for 100500026	bra-r.6 for 103871588	bra-r.6 for 103858348	vvi-u.5 for 100256505	vvi-u.5 for 100267536	vvi-u.5 for 100254328	ppo-u.5 for 7472992	ppo-u.5 for 7469930	ppo-u.5 for 7470091	mtr-u.5 for 11416031	mtr-u.5 for 11446936	ghi-r.1 for 107889233	ghi-r.1 for 107897255	ghi-r.1 for 107901565	bna-r.1 for 106360279	bna-r.1 for 106388387	bna-r.1 for 106346333	cit-r.1 for 102624359	cit-r.1 for 102611194	osa-u.5 for 4342449	osa-u.5 for 4333584	osa-u.5 for 4352818	zma-u.5 for 118471992	zma-u.5 for 100283014	zma-u.5 for 103626034	tae-r.2 for 123104886	tae-r.2 for 123122693	hvu-r.1 for 123452083	sbi-r.1 for 8071489	bdi-r.1 for 100837815	bdi-r.1 for 100826382	bdi-r.1 for 100827245

Please wait a moment.

Ortholog

Ortholog ID: 1260

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC102581691

LOC102605344

LOC102578472

YABBY5b

YABBY5a

YABBY2

LOC107783814

LOC107781736

LOC107821376

YAB5

YAB2

Function^*

putative axial regulator YABBY 2

axial regulator YABBY 5-like

axial regulator YABBY5b

axial regulator YABBY5a

YABBY transcription factor

putative axial regulator YABBY 2

axial regulator YABBY 5

plant-specific transcription factor YABBY family protein

Plant-specific transcription factor YABBY family protein

protein YABBY 12

protein YABBY 9

protein YABBY 14

putative axial regulator YABBY 2

axial regulator YABBY 5

putative axial regulator YABBY 2

axial regulator YABBY 5

putative axial regulator YABBY 2

axial regulator YABBY 5

putative axial regulator YABBY 2

axial regulator YABBY 5

putative axial regulator YABBY 2

axial regulator YABBY 5

protein YABBY 1-like

protein YABBY 2-like

protein YABBY 6-like

protein YABBY 2-like

protein YABBY 2

uncharacterized LOC100272921

protein YABBY 2

protein YABBY 2-like

protein YABBY 6

protein YABBY 1

protein YABBY 6

protein YABBY 2

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00061	Fatty acid biosynthesis	2
nta00071	Fatty acid degradation	2
nta01212	Fatty acid metabolism	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00561	Glycerolipid metabolism	2
mtr00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	6
ghi03015	mRNA surveillance pathway	2
ghi03018	RNA degradation	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00904	Diterpenoid biosynthesis	2
cit00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	3
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	8

Expression

Expression pattern

Entrez Gene ID^*

102581691

102605344

102578472

101258923

101247536

100191118

107783814

107781736

107821376

817199

3766682

100785458

100500026

100815973

103871588

103858348

100256505

100267536

100254328

7472992

7470091

11416031

11446936

107907328

107953694

107948801

106383131

106414914

106438408

102624359

102611194

4342449

4333584

4352818

118471992

103626034

100272921

123104886

123122693

123452083

8071489

100837815

100826382

100827245

The preparation time of this page was 0.2 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	2	3	3	2	3	3	2	3	3	2	1	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102581691 (sot-r.1 coexpression data)

Top 50 enrichment test to 102581691 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**