ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	118471992	protein YABBY 2-like
zma-r.6	118471992	protein YABBY 2-like
zma-u.5	103626034	protein YABBY 2
zma-u.5	103645531	uncharacterized LOC103645531
zma-u.5	100272921	uncharacterized LOC100272921
sbi-r.1	8071489	protein YABBY 6
osa-u.5	4342449	protein YABBY 1-like
osa-u.5	4333584	protein YABBY 2-like
osa-u.5	4352818	protein YABBY 6-like
tae-r.2	123104886	protein YABBY 2
hvu-r.1	123452083	protein YABBY 2-like
bdi-r.1	100837815	protein YABBY 1
bdi-r.1	100826382	protein YABBY 6
bdi-r.1	100827245	protein YABBY 2
ath-u.5	YAB5	plant-specific transcription factor YABBY family protein
ath-u.5	YAB2	Plant-specific transcription factor YABBY family protein
gma-u.5	100500091	protein YABBY 11
gma-u.5	100500026	protein YABBY 9
gma-u.5	100499942	protein YABBY 15
sly-u.5	YABBY5b	axial regulator YABBY5b
sly-u.5	YABBY2	YABBY transcription factor
sly-u.5	YABBY5a	axial regulator YABBY5a
bra-r.6	103871588	putative axial regulator YABBY 2
bra-r.6	103858348	axial regulator YABBY 5
vvi-u.5	100256505	putative axial regulator YABBY 2
vvi-u.5	100267536	axial regulator YABBY 5
vvi-u.5	100254328	axial regulator YABBY 5
ppo-u.5	7470091	axial regulator YABBY 5
ppo-u.5	7472992	axial regulator YABBY 5
mtr-u.5	11416031	putative axial regulator YABBY 2
mtr-u.5	11446936	putative axial regulator YABBY 2
ghi-r.1	107917100	axial regulator YABBY 5
ghi-r.1	107907328	axial regulator YABBY 5
ghi-r.1	107897255	axial regulator YABBY 5
bna-r.1	106438408	axial regulator YABBY 5
bna-r.1	106383131	putative axial regulator YABBY 2
bna-r.1	106346333	putative axial regulator YABBY 2
sot-r.1	102605344	putative axial regulator YABBY 2
sot-r.1	102597616	axial regulator YABBY 5-like
sot-r.1	102578472	axial regulator YABBY 5-like
cit-r.1	102611194	axial regulator YABBY 5
cit-r.1	102624359	putative axial regulator YABBY 2
nta-r.1	107763706	axial regulator YABBY 5
nta-r.1	107821376	axial regulator YABBY 5
nta-r.1	107771844	axial regulator YABBY 5

Top 50 coexpressed genes to 118471992 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 118471992 (zma-u.5 coexpression data)

CoexMap"118471992"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010158 [list] [network] abaxial cell fate specification	(24 genes)	IEA
GO:0045165 [list] [network] cell fate commitment	(41 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(243 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(3371 genes)

IEA

GO MF

Protein

XP_035814853.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, chlo_mito 5, mito 1

(predict for XP_035814853.1)

Subcellular
localization
TargetP

chlo 5

(predict for XP_035814853.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 118471992	zma-r.6 for 118471992	zma-u.5 for 103626034	zma-u.5 for 103645531	zma-u.5 for 100272921	sbi-r.1 for 8071489	osa-u.5 for 4342449	osa-u.5 for 4333584	osa-u.5 for 4352818	tae-r.2 for 123104886	hvu-r.1 for 123452083	bdi-r.1 for 100837815	bdi-r.1 for 100826382	bdi-r.1 for 100827245	ath-u.5 for YAB5	ath-u.5 for YAB2	gma-u.5 for 100500091	gma-u.5 for 100500026	gma-u.5 for 100499942	sly-u.5 for YABBY5b	sly-u.5 for YABBY2	sly-u.5 for YABBY5a	bra-r.6 for 103871588	bra-r.6 for 103858348	vvi-u.5 for 100256505	vvi-u.5 for 100267536	vvi-u.5 for 100254328	ppo-u.5 for 7470091	ppo-u.5 for 7472992	mtr-u.5 for 11416031	mtr-u.5 for 11446936	ghi-r.1 for 107917100	ghi-r.1 for 107907328	ghi-r.1 for 107897255	bna-r.1 for 106438408	bna-r.1 for 106383131	bna-r.1 for 106346333	sot-r.1 for 102605344	sot-r.1 for 102597616	sot-r.1 for 102578472	cit-r.1 for 102611194	cit-r.1 for 102624359	nta-r.1 for 107763706	nta-r.1 for 107821376	nta-r.1 for 107771844

Ortholog

Ortholog ID: 1260

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

YAB5

YAB2

LOC100500026

LOC100785458

LOC100815973

YABBY5b

YABBY2

YABBY5a

Function^*

protein YABBY 2-like

protein YABBY 2

uncharacterized LOC100272921

protein YABBY 6

protein YABBY 1-like

protein YABBY 2-like

protein YABBY 6-like

protein YABBY 2

protein YABBY 2-like

protein YABBY 1

protein YABBY 6

protein YABBY 2

plant-specific transcription factor YABBY family protein

Plant-specific transcription factor YABBY family protein

protein YABBY 9

protein YABBY 12

protein YABBY 14

axial regulator YABBY5b

YABBY transcription factor

axial regulator YABBY5a